RNA id: XR_006250808.1



Basic Information


Item Value
RNA id XR_006250808.1
length 119
RNA type rRNA
GC content 0.51
exon number 1
gene id LOC122343598
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 15953048 ~ 15953166 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gcttacggccataccacccttttcacgcctgatctcgtctgatctcagaagctaagcagagttgggcctggttagtacttggatgggagactgcctaggaataccaggtgctgtaagtt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU42859 lncRNA downstream 24148 15928143 ~ 15928900 (-) True G28897
TU42857 lncRNA downstream 109309 15843405 ~ 15843739 (-) True G28895
TU42849 lncRNA downstream 219165 15733363 ~ 15733883 (-) True G28887
TU42824 lncRNA downstream 297867 15565419 ~ 15655181 (-) True G28870
XR_006250641.1 lncRNA downstream 507819 15443764 ~ 15445229 (-) True LOC122342747
TU42891 lncRNA upstream 425534 16378700 ~ 16383670 (-) True G28916
TU42910 lncRNA upstream 458694 16411860 ~ 16419956 (-) True G28933
TU42913 lncRNA upstream 458694 16411860 ~ 16419956 (-) False G28933
TU42916 lncRNA upstream 459361 16412527 ~ 16420139 (-) True G28935
TU42950 lncRNA upstream 507596 16460762 ~ 16461511 (-) True G28966
XM_043236016.1 mRNA downstream 272930 15674819 ~ 15680118 (-) False tmem19
XM_043236018.1 mRNA downstream 273024 15674819 ~ 15680024 (-) False tmem19
XM_043236017.1 mRNA downstream 273024 15674819 ~ 15680024 (-) True tmem19
XM_043236424.1 mRNA downstream 279814 15664443 ~ 15673234 (-) True zgc:171422
XM_043236426.1 mRNA downstream 288742 15656075 ~ 15664306 (-) False slc37a3
XM_043236543.1 mRNA upstream 524625 16477791 ~ 16483176 (-) True LOC122342598
XM_043237033.1 mRNA upstream 531401 16484567 ~ 16498839 (-) True LOC122342885
XM_043236534.1 mRNA upstream 584814 16537980 ~ 16542902 (-) True LOC122342596
XM_043236544.1 mRNA upstream 619961 16573127 ~ 16593094 (-) True LOC122342599
XM_043237521.1 mRNA upstream 757358 16710524 ~ 16724794 (-) False LOC122343211
XR_006250834.1 other downstream 1460 15951470 ~ 15951588 (-) True LOC122343845
XR_006250807.1 other downstream 1859 15951071 ~ 15951189 (-) True LOC122343586
XR_006250798.1 other downstream 3048 15949882 ~ 15950000 (-) True LOC122343536
XR_006250804.1 other downstream 6237 15946693 ~ 15946811 (-) True LOC122343564
XR_006250900.1 other downstream 13788 15939142 ~ 15939260 (-) True LOC122343919
XR_006250911.1 other upstream 278 15953444 ~ 15953562 (-) True LOC122343931
XR_006250799.1 other upstream 3443 15956609 ~ 15956727 (-) True LOC122343537
XR_006250878.1 other upstream 3839 15957005 ~ 15957123 (-) True LOC122343894
XR_006250800.1 other upstream 5025 15958191 ~ 15958309 (-) True LOC122343538
XR_006250805.1 other upstream 15704 15968870 ~ 15968988 (-) True LOC122343575