RNA id: XR_006250816.1



Basic Information


Item Value
RNA id XR_006250816.1
length 119
RNA type rRNA
GC content 0.50
exon number 1
gene id LOC122343667
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 15998348 ~ 15998466 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gcttacggccataccaccctgttcacgcctgatctcgtctgatctcagaagctaagcagagttgggcctagttagtacttggatgggagacttcCTAGGAAttccaggtgctgtaagtt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU42859 lncRNA downstream 69448 15928143 ~ 15928900 (-) True G28897
TU42857 lncRNA downstream 154609 15843405 ~ 15843739 (-) True G28895
TU42849 lncRNA downstream 264465 15733363 ~ 15733883 (-) True G28887
TU42824 lncRNA downstream 343167 15565419 ~ 15655181 (-) True G28870
XR_006250641.1 lncRNA downstream 553119 15443764 ~ 15445229 (-) True LOC122342747
TU42891 lncRNA upstream 380234 16378700 ~ 16383670 (-) True G28916
TU42910 lncRNA upstream 413394 16411860 ~ 16419956 (-) True G28933
TU42913 lncRNA upstream 413394 16411860 ~ 16419956 (-) False G28933
TU42916 lncRNA upstream 414061 16412527 ~ 16420139 (-) True G28935
TU42950 lncRNA upstream 462296 16460762 ~ 16461511 (-) True G28966
XM_043236016.1 mRNA downstream 318230 15674819 ~ 15680118 (-) False tmem19
XM_043236018.1 mRNA downstream 318324 15674819 ~ 15680024 (-) False tmem19
XM_043236017.1 mRNA downstream 318324 15674819 ~ 15680024 (-) True tmem19
XM_043236424.1 mRNA downstream 325114 15664443 ~ 15673234 (-) True zgc:171422
XM_043236426.1 mRNA downstream 334042 15656075 ~ 15664306 (-) False slc37a3
XM_043236543.1 mRNA upstream 479325 16477791 ~ 16483176 (-) True LOC122342598
XM_043237033.1 mRNA upstream 486101 16484567 ~ 16498839 (-) True LOC122342885
XM_043236534.1 mRNA upstream 539514 16537980 ~ 16542902 (-) True LOC122342596
XM_043236544.1 mRNA upstream 574661 16573127 ~ 16593094 (-) True LOC122342599
XM_043237521.1 mRNA upstream 712058 16710524 ~ 16724794 (-) False LOC122343211
XR_006250815.1 other downstream 1472 15996758 ~ 15996876 (-) True LOC122343656
XR_006250837.1 other downstream 2662 15995568 ~ 15995686 (-) True LOC122343848
XR_006250835.1 other downstream 9012 15989218 ~ 15989336 (-) True LOC122343846
XR_006250812.1 other downstream 18289 15979941 ~ 15980059 (-) True LOC122343632
XR_006250905.1 other downstream 19073 15979157 ~ 15979275 (-) True LOC122343925
XR_006250839.1 other upstream 2248 16000714 ~ 16000832 (-) True LOC122343849
XR_006250801.1 other upstream 4622 16003088 ~ 16003206 (-) True LOC122343539
XR_006250797.1 other upstream 5805 16004271 ~ 16004389 (-) True LOC122343535
XR_006250889.1 other upstream 6994 16005460 ~ 16005578 (-) True LOC122343907
XR_006250840.1 other upstream 9380 16007846 ~ 16007964 (-) True LOC122343850

Expression Profile