RNA id: XR_006250826.1



Basic Information


Item Value
RNA id XR_006250826.1
length 119
RNA type rRNA
GC content 0.51
exon number 1
gene id LOC122343769
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 15892822 ~ 15892940 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gcttacggccataccaccctgttcacgcctgatctcgtctgatctcagaagctaagcagagttgggcctagttagtacttggatgggagactgcctaggaataccaggtgctgtaagtt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU42857 lncRNA downstream 49083 15843405 ~ 15843739 (-) True G28895
TU42849 lncRNA downstream 158939 15733363 ~ 15733883 (-) True G28887
TU42824 lncRNA downstream 237641 15565419 ~ 15655181 (-) True G28870
XR_006250641.1 lncRNA downstream 447593 15443764 ~ 15445229 (-) True LOC122342747
TU42788 lncRNA downstream 474584 15416856 ~ 15418238 (-) True G28850
TU42859 lncRNA upstream 35203 15928143 ~ 15928900 (-) True G28897
TU42891 lncRNA upstream 485760 16378700 ~ 16383670 (-) True G28916
TU42910 lncRNA upstream 518920 16411860 ~ 16419956 (-) True G28933
TU42913 lncRNA upstream 518920 16411860 ~ 16419956 (-) False G28933
TU42916 lncRNA upstream 519587 16412527 ~ 16420139 (-) True G28935
XM_043236016.1 mRNA downstream 212704 15674819 ~ 15680118 (-) False tmem19
XM_043236018.1 mRNA downstream 212798 15674819 ~ 15680024 (-) False tmem19
XM_043236017.1 mRNA downstream 212798 15674819 ~ 15680024 (-) True tmem19
XM_043236424.1 mRNA downstream 219588 15664443 ~ 15673234 (-) True zgc:171422
XM_043236426.1 mRNA downstream 228516 15656075 ~ 15664306 (-) False slc37a3
XM_043236543.1 mRNA upstream 584851 16477791 ~ 16483176 (-) True LOC122342598
XM_043237033.1 mRNA upstream 591627 16484567 ~ 16498839 (-) True LOC122342885
XM_043236534.1 mRNA upstream 645040 16537980 ~ 16542902 (-) True LOC122342596
XM_043236544.1 mRNA upstream 680187 16573127 ~ 16593094 (-) True LOC122342599
XM_043237521.1 mRNA upstream 817584 16710524 ~ 16724794 (-) False LOC122343211
XR_006250824.1 other downstream 1061 15891643 ~ 15891761 (-) True LOC122343757
XR_006250823.1 other downstream 3033 15889671 ~ 15889789 (-) True LOC122343746
XR_006250822.1 other downstream 3425 15889279 ~ 15889397 (-) True LOC122343733
XR_006250821.1 other downstream 3822 15888882 ~ 15889000 (-) True LOC122343722
XR_006250908.1 other downstream 10203 15882501 ~ 15882619 (-) True LOC122343928
XR_006250827.1 other upstream 277 15893217 ~ 15893335 (-) True LOC122343780
XR_006250828.1 other upstream 4246 15897186 ~ 15897304 (-) True LOC122343791
XR_006250829.1 other upstream 4646 15897586 ~ 15897704 (-) True LOC122343802
XR_006250830.1 other upstream 21152 15914092 ~ 15914210 (-) True LOC122343813
XR_006250803.1 other upstream 21550 15914490 ~ 15914608 (-) True LOC122343552