RNA id: XR_006250833.1



Basic Information


Item Value
RNA id XR_006250833.1
length 119
RNA type rRNA
GC content 0.51
exon number 1
gene id LOC122343844
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 15918846 ~ 15918964 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gcttacggccataccaccctgttcacgcctgatctcgtctgatctcagaagctaagcagagttgggcctagttagtacttggatgggagactgcctaggaataccaggtgctgtaagtt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU42857 lncRNA downstream 75107 15843405 ~ 15843739 (-) True G28895
TU42849 lncRNA downstream 184963 15733363 ~ 15733883 (-) True G28887
TU42824 lncRNA downstream 263665 15565419 ~ 15655181 (-) True G28870
XR_006250641.1 lncRNA downstream 473617 15443764 ~ 15445229 (-) True LOC122342747
TU42788 lncRNA downstream 500608 15416856 ~ 15418238 (-) True G28850
TU42859 lncRNA upstream 9179 15928143 ~ 15928900 (-) True G28897
TU42891 lncRNA upstream 459736 16378700 ~ 16383670 (-) True G28916
TU42910 lncRNA upstream 492896 16411860 ~ 16419956 (-) True G28933
TU42913 lncRNA upstream 492896 16411860 ~ 16419956 (-) False G28933
TU42916 lncRNA upstream 493563 16412527 ~ 16420139 (-) True G28935
XM_043236016.1 mRNA downstream 238728 15674819 ~ 15680118 (-) False tmem19
XM_043236018.1 mRNA downstream 238822 15674819 ~ 15680024 (-) False tmem19
XM_043236017.1 mRNA downstream 238822 15674819 ~ 15680024 (-) True tmem19
XM_043236424.1 mRNA downstream 245612 15664443 ~ 15673234 (-) True zgc:171422
XM_043236426.1 mRNA downstream 254540 15656075 ~ 15664306 (-) False slc37a3
XM_043236543.1 mRNA upstream 558827 16477791 ~ 16483176 (-) True LOC122342598
XM_043237033.1 mRNA upstream 565603 16484567 ~ 16498839 (-) True LOC122342885
XM_043236534.1 mRNA upstream 619016 16537980 ~ 16542902 (-) True LOC122342596
XM_043236544.1 mRNA upstream 654163 16573127 ~ 16593094 (-) True LOC122342599
XM_043237521.1 mRNA upstream 791560 16710524 ~ 16724794 (-) False LOC122343211
XR_006250832.1 other downstream 2252 15916476 ~ 15916594 (-) True LOC122343837
XR_006250831.1 other downstream 2648 15916080 ~ 15916198 (-) True LOC122343825
XR_006250803.1 other downstream 4238 15914490 ~ 15914608 (-) True LOC122343552
XR_006250830.1 other downstream 4636 15914092 ~ 15914210 (-) True LOC122343813
XR_006250829.1 other downstream 21142 15897586 ~ 15897704 (-) True LOC122343802
XR_006250909.1 other upstream 1875 15920839 ~ 15920957 (-) True LOC122343929
TU42860 other upstream 13530 15932494 ~ 15932864 (-) True G28898
XR_006250811.1 other upstream 19781 15938745 ~ 15938863 (-) True LOC122343620
XR_006250900.1 other upstream 20178 15939142 ~ 15939260 (-) True LOC122343919
XR_006250804.1 other upstream 27729 15946693 ~ 15946811 (-) True LOC122343564