RNA id: XR_006250834.1



Basic Information


Item Value
RNA id XR_006250834.1
length 119
RNA type rRNA
GC content 0.51
exon number 1
gene id LOC122343845
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 15951470 ~ 15951588 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gcttacggccataccaccctgttcacgcctgatctcgtctgatctcagaagctaagcagagttgggcctagttagtacttggatgggagactgcctaggaataccaggtgctgtaagtt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU42859 lncRNA downstream 22570 15928143 ~ 15928900 (-) True G28897
TU42857 lncRNA downstream 107731 15843405 ~ 15843739 (-) True G28895
TU42849 lncRNA downstream 217587 15733363 ~ 15733883 (-) True G28887
TU42824 lncRNA downstream 296289 15565419 ~ 15655181 (-) True G28870
XR_006250641.1 lncRNA downstream 506241 15443764 ~ 15445229 (-) True LOC122342747
TU42891 lncRNA upstream 427112 16378700 ~ 16383670 (-) True G28916
TU42910 lncRNA upstream 460272 16411860 ~ 16419956 (-) True G28933
TU42913 lncRNA upstream 460272 16411860 ~ 16419956 (-) False G28933
TU42916 lncRNA upstream 460939 16412527 ~ 16420139 (-) True G28935
TU42950 lncRNA upstream 509174 16460762 ~ 16461511 (-) True G28966
XM_043236016.1 mRNA downstream 271352 15674819 ~ 15680118 (-) False tmem19
XM_043236018.1 mRNA downstream 271446 15674819 ~ 15680024 (-) False tmem19
XM_043236017.1 mRNA downstream 271446 15674819 ~ 15680024 (-) True tmem19
XM_043236424.1 mRNA downstream 278236 15664443 ~ 15673234 (-) True zgc:171422
XM_043236426.1 mRNA downstream 287164 15656075 ~ 15664306 (-) False slc37a3
XM_043236543.1 mRNA upstream 526203 16477791 ~ 16483176 (-) True LOC122342598
XM_043237033.1 mRNA upstream 532979 16484567 ~ 16498839 (-) True LOC122342885
XM_043236534.1 mRNA upstream 586392 16537980 ~ 16542902 (-) True LOC122342596
XM_043236544.1 mRNA upstream 621539 16573127 ~ 16593094 (-) True LOC122342599
XM_043237521.1 mRNA upstream 758936 16710524 ~ 16724794 (-) False LOC122343211
XR_006250807.1 other downstream 281 15951071 ~ 15951189 (-) True LOC122343586
XR_006250798.1 other downstream 1470 15949882 ~ 15950000 (-) True LOC122343536
XR_006250804.1 other downstream 4659 15946693 ~ 15946811 (-) True LOC122343564
XR_006250900.1 other downstream 12210 15939142 ~ 15939260 (-) True LOC122343919
XR_006250811.1 other downstream 12607 15938745 ~ 15938863 (-) True LOC122343620
XR_006250808.1 other upstream 1460 15953048 ~ 15953166 (-) True LOC122343598
XR_006250911.1 other upstream 1856 15953444 ~ 15953562 (-) True LOC122343931
XR_006250799.1 other upstream 5021 15956609 ~ 15956727 (-) True LOC122343537
XR_006250878.1 other upstream 5417 15957005 ~ 15957123 (-) True LOC122343894
XR_006250800.1 other upstream 6603 15958191 ~ 15958309 (-) True LOC122343538