RNA id: XR_006250837.1



Basic Information


Item Value
RNA id XR_006250837.1
length 119
RNA type rRNA
GC content 0.51
exon number 1
gene id LOC122343848
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 15995568 ~ 15995686 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gcttacggccataccaccctgttcacgcctgatctcgtctgatctcagaagctaagcagagttgggcctagttagtacttggatgggagactgcctaggaataccaggtgctgtaagtt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU42859 lncRNA downstream 66668 15928143 ~ 15928900 (-) True G28897
TU42857 lncRNA downstream 151829 15843405 ~ 15843739 (-) True G28895
TU42849 lncRNA downstream 261685 15733363 ~ 15733883 (-) True G28887
TU42824 lncRNA downstream 340387 15565419 ~ 15655181 (-) True G28870
XR_006250641.1 lncRNA downstream 550339 15443764 ~ 15445229 (-) True LOC122342747
TU42891 lncRNA upstream 383014 16378700 ~ 16383670 (-) True G28916
TU42910 lncRNA upstream 416174 16411860 ~ 16419956 (-) True G28933
TU42913 lncRNA upstream 416174 16411860 ~ 16419956 (-) False G28933
TU42916 lncRNA upstream 416841 16412527 ~ 16420139 (-) True G28935
TU42950 lncRNA upstream 465076 16460762 ~ 16461511 (-) True G28966
XM_043236016.1 mRNA downstream 315450 15674819 ~ 15680118 (-) False tmem19
XM_043236018.1 mRNA downstream 315544 15674819 ~ 15680024 (-) False tmem19
XM_043236017.1 mRNA downstream 315544 15674819 ~ 15680024 (-) True tmem19
XM_043236424.1 mRNA downstream 322334 15664443 ~ 15673234 (-) True zgc:171422
XM_043236426.1 mRNA downstream 331262 15656075 ~ 15664306 (-) False slc37a3
XM_043236543.1 mRNA upstream 482105 16477791 ~ 16483176 (-) True LOC122342598
XM_043237033.1 mRNA upstream 488881 16484567 ~ 16498839 (-) True LOC122342885
XM_043236534.1 mRNA upstream 542294 16537980 ~ 16542902 (-) True LOC122342596
XM_043236544.1 mRNA upstream 577441 16573127 ~ 16593094 (-) True LOC122342599
XM_043237521.1 mRNA upstream 714838 16710524 ~ 16724794 (-) False LOC122343211
XR_006250835.1 other downstream 6232 15989218 ~ 15989336 (-) True LOC122343846
XR_006250812.1 other downstream 15509 15979941 ~ 15980059 (-) True LOC122343632
XR_006250905.1 other downstream 16293 15979157 ~ 15979275 (-) True LOC122343925
XR_006250825.1 other downstream 16691 15978759 ~ 15978877 (-) True LOC122343763
XR_006250802.1 other downstream 19460 15975990 ~ 15976108 (-) True LOC122343541
XR_006250815.1 other upstream 1072 15996758 ~ 15996876 (-) True LOC122343656
XR_006250816.1 other upstream 2662 15998348 ~ 15998466 (-) True LOC122343667
XR_006250839.1 other upstream 5028 16000714 ~ 16000832 (-) True LOC122343849
XR_006250801.1 other upstream 7402 16003088 ~ 16003206 (-) True LOC122343539
XR_006250797.1 other upstream 8585 16004271 ~ 16004389 (-) True LOC122343535