RNA id: XR_006250848.1



Basic Information


Item Value
RNA id XR_006250848.1
length 119
RNA type rRNA
GC content 0.51
exon number 1
gene id LOC122343860
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 16011416 ~ 16011534 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gcttacggccataccaccctgttcacgcctgatctcgtctgatctcagaagctaagcagagttgggcctagttagtacttggatgggagactgcctaggaataccaggtgctgtaagtt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU42859 lncRNA downstream 82516 15928143 ~ 15928900 (-) True G28897
TU42857 lncRNA downstream 167677 15843405 ~ 15843739 (-) True G28895
TU42849 lncRNA downstream 277533 15733363 ~ 15733883 (-) True G28887
TU42824 lncRNA downstream 356235 15565419 ~ 15655181 (-) True G28870
XR_006250641.1 lncRNA downstream 566187 15443764 ~ 15445229 (-) True LOC122342747
TU42891 lncRNA upstream 367166 16378700 ~ 16383670 (-) True G28916
TU42910 lncRNA upstream 400326 16411860 ~ 16419956 (-) True G28933
TU42913 lncRNA upstream 400326 16411860 ~ 16419956 (-) False G28933
TU42916 lncRNA upstream 400993 16412527 ~ 16420139 (-) True G28935
TU42950 lncRNA upstream 449228 16460762 ~ 16461511 (-) True G28966
XM_043236016.1 mRNA downstream 331298 15674819 ~ 15680118 (-) False tmem19
XM_043236018.1 mRNA downstream 331392 15674819 ~ 15680024 (-) False tmem19
XM_043236017.1 mRNA downstream 331392 15674819 ~ 15680024 (-) True tmem19
XM_043236424.1 mRNA downstream 338182 15664443 ~ 15673234 (-) True zgc:171422
XM_043236426.1 mRNA downstream 347110 15656075 ~ 15664306 (-) False slc37a3
XM_043236543.1 mRNA upstream 466257 16477791 ~ 16483176 (-) True LOC122342598
XM_043237033.1 mRNA upstream 473033 16484567 ~ 16498839 (-) True LOC122342885
XM_043236534.1 mRNA upstream 526446 16537980 ~ 16542902 (-) True LOC122342596
XM_043236544.1 mRNA upstream 561593 16573127 ~ 16593094 (-) True LOC122342599
XM_043237521.1 mRNA upstream 698990 16710524 ~ 16724794 (-) False LOC122343211
XR_006250813.1 other downstream 283 16011015 ~ 16011133 (-) True LOC122343643
XR_006250907.1 other downstream 1465 16009833 ~ 16009951 (-) True LOC122343927
XR_006250840.1 other downstream 3452 16007846 ~ 16007964 (-) True LOC122343850
XR_006250889.1 other downstream 5838 16005460 ~ 16005578 (-) True LOC122343907
XR_006250797.1 other downstream 7027 16004271 ~ 16004389 (-) True LOC122343535
XR_006250836.1 other upstream 6124 16017658 ~ 16017776 (-) True LOC122343847
XR_006250859.1 other upstream 6523 16018057 ~ 16018175 (-) True LOC122343872
XR_006250906.1 other upstream 8507 16020041 ~ 16020159 (-) True LOC122343926
XR_006250870.1 other upstream 8910 16020444 ~ 16020562 (-) True LOC122343883
TU43020 other upstream 696240 16707774 ~ 16708960 (-) True G29022