RNA id: XR_006250851.1



Basic Information


Item Value
RNA id XR_006250851.1
length 163
RNA type snRNA
GC content 0.56
exon number 1
gene id LOC122343863
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 25361823 ~ 25361985 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ATACTTACCTGGCAGGGGAGACACCATGATCAAGAAGGTGGTTCACCCAGGGCGAGGCTCGACCATTGCACTCGGTTGTGCTGACCCCCTGCGAATTCCCAAATGTGGGAATCTCGACTGCATAATTTATGGTAGTGGGGGACTGCGTTCGCGCTCTCCCCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46148 lncRNA downstream 13178 25348374 ~ 25348645 (-) True G31237
TU46140 lncRNA downstream 46254 25315190 ~ 25315569 (-) True G31229
TU46136 lncRNA downstream 179479 25182013 ~ 25182344 (-) True G31225
TU46133 lncRNA downstream 378494 24983088 ~ 24983329 (-) True G31222
TU46132 lncRNA downstream 379134 24982326 ~ 24982689 (-) True G31221
TU46172 lncRNA upstream 74121 25436106 ~ 25437120 (-) True G31250
TU46175 lncRNA upstream 101168 25463153 ~ 25463544 (-) True G31253
TU46281 lncRNA upstream 272963 25634948 ~ 25635148 (-) True G31335
TU46297 lncRNA upstream 335445 25697430 ~ 25697757 (-) True G31351
TU46298 lncRNA upstream 340285 25702270 ~ 25703067 (-) True G31352
XM_043236134.1 mRNA downstream 327149 25032134 ~ 25034674 (-) True LOC122342351
XM_043236132.1 mRNA downstream 380200 24963974 ~ 24981623 (-) True LOC122342349
XM_043236177.1 mRNA downstream 602516 24754056 ~ 24759307 (-) True LOC122342407
XM_043237384.1 mRNA downstream 731189 24627064 ~ 24630634 (-) False LOC122343065
XM_043236135.1 mRNA upstream 125203 25487188 ~ 25496806 (-) True LOC122342354
XM_043236417.1 mRNA upstream 192799 25554784 ~ 25567493 (-) False irf10
XM_043236416.1 mRNA upstream 192799 25554784 ~ 25567493 (-) True irf10
XM_043236421.1 mRNA upstream 248630 25610615 ~ 25625124 (-) True samhd1
XM_043236423.1 mRNA upstream 264622 25626607 ~ 25629375 (-) True mtg2
XR_006250872.1 other downstream 1346 25360286 ~ 25360477 (-) True LOC122343885
XR_006250855.1 other downstream 1789 25359873 ~ 25360034 (-) True LOC122343867
XR_006250861.1 other downstream 3312 25358321 ~ 25358511 (-) True LOC122343874
XR_006250842.1 other downstream 3755 25357905 ~ 25358068 (-) True LOC122343853
XR_006250874.1 other downstream 5294 25356338 ~ 25356529 (-) True LOC122343887
XR_006250871.1 other upstream 250 25362235 ~ 25362428 (-) True LOC122343884
XR_006250853.1 other upstream 1809 25363794 ~ 25363955 (-) True LOC122343865
XR_006250862.1 other upstream 2224 25364209 ~ 25364399 (-) True LOC122343875
XR_006250849.1 other upstream 3792 25365777 ~ 25365938 (-) True LOC122343861
XR_006250863.1 other upstream 4204 25366189 ~ 25366379 (-) True LOC122343876