RNA id: XR_006250853.1



Basic Information


Item Value
RNA id XR_006250853.1
length 162
RNA type snRNA
GC content 0.55
exon number 1
gene id LOC122343865
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 25363794 ~ 25363955 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ATACTTACCTGGCAGGGGAGACACCATGATCAAGAAGGTGGTTCACCCAGGCGAGGCTCGACCATTGCACTCGGTTGTGCTGACCTCTGCGAATTCCCCAAATGTGGGAATCTCGACTGCATAATTTATGGTAGTGGGGGACTGCGTTCGCGCTCTCCCCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46148 lncRNA downstream 15149 25348374 ~ 25348645 (-) True G31237
TU46140 lncRNA downstream 48225 25315190 ~ 25315569 (-) True G31229
TU46136 lncRNA downstream 181450 25182013 ~ 25182344 (-) True G31225
TU46133 lncRNA downstream 380465 24983088 ~ 24983329 (-) True G31222
TU46132 lncRNA downstream 381105 24982326 ~ 24982689 (-) True G31221
TU46172 lncRNA upstream 72151 25436106 ~ 25437120 (-) True G31250
TU46175 lncRNA upstream 99198 25463153 ~ 25463544 (-) True G31253
TU46281 lncRNA upstream 270993 25634948 ~ 25635148 (-) True G31335
TU46297 lncRNA upstream 333475 25697430 ~ 25697757 (-) True G31351
TU46298 lncRNA upstream 338315 25702270 ~ 25703067 (-) True G31352
XM_043236134.1 mRNA downstream 329120 25032134 ~ 25034674 (-) True LOC122342351
XM_043236132.1 mRNA downstream 382171 24963974 ~ 24981623 (-) True LOC122342349
XM_043236177.1 mRNA downstream 604487 24754056 ~ 24759307 (-) True LOC122342407
XM_043237384.1 mRNA downstream 733160 24627064 ~ 24630634 (-) False LOC122343065
XM_043236135.1 mRNA upstream 123233 25487188 ~ 25496806 (-) True LOC122342354
XM_043236417.1 mRNA upstream 190829 25554784 ~ 25567493 (-) False irf10
XM_043236416.1 mRNA upstream 190829 25554784 ~ 25567493 (-) True irf10
XM_043236421.1 mRNA upstream 246660 25610615 ~ 25625124 (-) True samhd1
XM_043236423.1 mRNA upstream 262652 25626607 ~ 25629375 (-) True mtg2
XR_006250871.1 other downstream 1366 25362235 ~ 25362428 (-) True LOC122343884
XR_006250851.1 other downstream 1809 25361823 ~ 25361985 (-) True LOC122343863
XR_006250872.1 other downstream 3317 25360286 ~ 25360477 (-) True LOC122343885
XR_006250855.1 other downstream 3760 25359873 ~ 25360034 (-) True LOC122343867
XR_006250861.1 other downstream 5283 25358321 ~ 25358511 (-) True LOC122343874
XR_006250862.1 other upstream 254 25364209 ~ 25364399 (-) True LOC122343875
XR_006250849.1 other upstream 1822 25365777 ~ 25365938 (-) True LOC122343861
XR_006250863.1 other upstream 2234 25366189 ~ 25366379 (-) True LOC122343876
XR_006250850.1 other upstream 3847 25367802 ~ 25367965 (-) True LOC122343862
XR_006250875.1 other upstream 4258 25368213 ~ 25368401 (-) True LOC122343888