RNA id: XR_006250870.1



Basic Information


Item Value
RNA id XR_006250870.1
length 119
RNA type rRNA
GC content 0.51
exon number 1
gene id LOC122343883
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 16020444 ~ 16020562 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gcttacggccataccaccctgttcacgcctgatctcgtctgatctcagaagctaagcagagttgggcctagttagtacttggatgggagactgcctaggaataccaggtgctgtaagtt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU42859 lncRNA downstream 91544 15928143 ~ 15928900 (-) True G28897
TU42857 lncRNA downstream 176705 15843405 ~ 15843739 (-) True G28895
TU42849 lncRNA downstream 286561 15733363 ~ 15733883 (-) True G28887
TU42824 lncRNA downstream 365263 15565419 ~ 15655181 (-) True G28870
XR_006250641.1 lncRNA downstream 575215 15443764 ~ 15445229 (-) True LOC122342747
TU42891 lncRNA upstream 358138 16378700 ~ 16383670 (-) True G28916
TU42910 lncRNA upstream 391298 16411860 ~ 16419956 (-) True G28933
TU42913 lncRNA upstream 391298 16411860 ~ 16419956 (-) False G28933
TU42916 lncRNA upstream 391965 16412527 ~ 16420139 (-) True G28935
TU42950 lncRNA upstream 440200 16460762 ~ 16461511 (-) True G28966
XM_043236016.1 mRNA downstream 340326 15674819 ~ 15680118 (-) False tmem19
XM_043236018.1 mRNA downstream 340420 15674819 ~ 15680024 (-) False tmem19
XM_043236017.1 mRNA downstream 340420 15674819 ~ 15680024 (-) True tmem19
XM_043236424.1 mRNA downstream 347210 15664443 ~ 15673234 (-) True zgc:171422
XM_043236426.1 mRNA downstream 356138 15656075 ~ 15664306 (-) False slc37a3
XM_043236543.1 mRNA upstream 457229 16477791 ~ 16483176 (-) True LOC122342598
XM_043237033.1 mRNA upstream 464005 16484567 ~ 16498839 (-) True LOC122342885
XM_043236534.1 mRNA upstream 517418 16537980 ~ 16542902 (-) True LOC122342596
XM_043236544.1 mRNA upstream 552565 16573127 ~ 16593094 (-) True LOC122342599
XM_043237521.1 mRNA upstream 689962 16710524 ~ 16724794 (-) False LOC122343211
XR_006250906.1 other downstream 285 16020041 ~ 16020159 (-) True LOC122343926
XR_006250859.1 other downstream 2269 16018057 ~ 16018175 (-) True LOC122343872
XR_006250836.1 other downstream 2668 16017658 ~ 16017776 (-) True LOC122343847
XR_006250848.1 other downstream 8910 16011416 ~ 16011534 (-) True LOC122343860
XR_006250813.1 other downstream 9311 16011015 ~ 16011133 (-) True LOC122343643
TU43020 other upstream 687212 16707774 ~ 16708960 (-) True G29022
XR_006250655.1 other upstream 866412 16886974 ~ 16900295 (-) True prkchb
TU43174 other upstream 986365 17006927 ~ 17017823 (-) True G29135
TU43209 other upstream 1098066 17118628 ~ 17122129 (-) True xrcc3
TU43541 other upstream 1616597 17637159 ~ 17638709 (-) False srd5a3