RNA id: XR_006250884.1


Basic Information

Item Value
RNA id XR_006250884.1
length 141
RNA type snRNA
GC content 0.50
exon number 1
gene id LOC122343902
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26193664 ~ 26193804 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

attctttcgcagaggcaatattgtagcctatgaggctcatccgaggcgcgatcattgctggttgaaaactttacccaatacctcgccgggatgacttgaaatacagtcagccttggcaatttttgccagcctgtccggagg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006250570.1 lncRNA upstream 30267 26161491 ~ 26163397 (+) True LOC122342452
XR_006250606.1 lncRNA upstream 276465 25916389 ~ 25917199 (+) True LOC122342592
TU46343 lncRNA upstream 376100 25817071 ~ 25817564 (+) True G31388
TU46346 lncRNA upstream 376209 25817031 ~ 25817455 (+) False G31388
TU46361 lncRNA downstream 242544 26436348 ~ 26436599 (+) True G31403
TU46362 lncRNA downstream 249702 26443506 ~ 26443991 (+) True G31404
TU46370 lncRNA downstream 284912 26478716 ~ 26478933 (+) True G31412
XR_006250760.1 lncRNA downstream 575127 26768931 ~ 26769820 (+) True LOC122343359
TU46380 lncRNA downstream 585489 26779293 ~ 26779606 (+) True G31420
XM_043236141.1 mRNA upstream 16046 26173194 ~ 26177618 (+) True LOC122342360
XM_043236137.1 mRNA upstream 216041 25974877 ~ 25977623 (+) True LOC122342357
XM_043236264.1 mRNA upstream 465013 25711662 ~ 25728651 (+) True col9a3
XM_043237791.1 mRNA upstream 484027 25703831 ~ 25709637 (+) True ogfr
XM_043236142.1 mRNA downstream 189112 26382916 ~ 26427239 (+) True LOC122342362
XM_043236145.1 mRNA downstream 571149 26764953 ~ 26767173 (+) True LOC122342366
XM_043236148.1 mRNA downstream 810897 27004701 ~ 27006306 (+) True LOC122342369
XM_043236149.1 mRNA downstream 1013932 27207736 ~ 27210602 (+) True LOC122342370
XM_043236327.1 mRNA downstream 1163008 27356812 ~ 27358163 (+) True LOC122342494
XR_006250890.1 other upstream 2457 26191068 ~ 26191207 (+) True LOC122343908
XR_006250883.1 other upstream 5066 26188458 ~ 26188598 (+) True LOC122343901
XR_006250882.1 other upstream 7675 26185849 ~ 26185989 (+) True LOC122343900
XR_006250881.1 other upstream 10289 26183235 ~ 26183375 (+) True LOC122343899
XR_006250891.1 other upstream 23008 26170519 ~ 26170656 (+) True LOC122343909
XR_006250879.1 other downstream 2463 26196267 ~ 26196406 (+) True LOC122343895
XR_006250885.1 other downstream 5059 26198863 ~ 26199003 (+) True LOC122343903
XR_006250886.1 other downstream 7665 26201469 ~ 26201609 (+) True LOC122343904
XR_006250880.1 other downstream 10265 26204069 ~ 26204208 (+) True LOC122343898
XR_006250887.1 other downstream 12906 26206710 ~ 26206850 (+) True LOC122343905