RNA id: XR_006250889.1



Basic Information


Item Value
RNA id XR_006250889.1
length 119
RNA type rRNA
GC content 0.50
exon number 1
gene id LOC122343907
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 16005460 ~ 16005578 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gcttacggccataccaccctgttcacgcctgatctcgtctgatctcagaagctaagcagagttgggcctaattagtacttggatgggagactgcctaggaataccaggtgctgtaagtt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU42859 lncRNA downstream 76560 15928143 ~ 15928900 (-) True G28897
TU42857 lncRNA downstream 161721 15843405 ~ 15843739 (-) True G28895
TU42849 lncRNA downstream 271577 15733363 ~ 15733883 (-) True G28887
TU42824 lncRNA downstream 350279 15565419 ~ 15655181 (-) True G28870
XR_006250641.1 lncRNA downstream 560231 15443764 ~ 15445229 (-) True LOC122342747
TU42891 lncRNA upstream 373122 16378700 ~ 16383670 (-) True G28916
TU42910 lncRNA upstream 406282 16411860 ~ 16419956 (-) True G28933
TU42913 lncRNA upstream 406282 16411860 ~ 16419956 (-) False G28933
TU42916 lncRNA upstream 406949 16412527 ~ 16420139 (-) True G28935
TU42950 lncRNA upstream 455184 16460762 ~ 16461511 (-) True G28966
XM_043236016.1 mRNA downstream 325342 15674819 ~ 15680118 (-) False tmem19
XM_043236018.1 mRNA downstream 325436 15674819 ~ 15680024 (-) False tmem19
XM_043236017.1 mRNA downstream 325436 15674819 ~ 15680024 (-) True tmem19
XM_043236424.1 mRNA downstream 332226 15664443 ~ 15673234 (-) True zgc:171422
XM_043236426.1 mRNA downstream 341154 15656075 ~ 15664306 (-) False slc37a3
XM_043236543.1 mRNA upstream 472213 16477791 ~ 16483176 (-) True LOC122342598
XM_043237033.1 mRNA upstream 478989 16484567 ~ 16498839 (-) True LOC122342885
XM_043236534.1 mRNA upstream 532402 16537980 ~ 16542902 (-) True LOC122342596
XM_043236544.1 mRNA upstream 567549 16573127 ~ 16593094 (-) True LOC122342599
XM_043237521.1 mRNA upstream 704946 16710524 ~ 16724794 (-) False LOC122343211
XR_006250797.1 other downstream 1071 16004271 ~ 16004389 (-) True LOC122343535
XR_006250801.1 other downstream 2254 16003088 ~ 16003206 (-) True LOC122343539
XR_006250839.1 other downstream 4628 16000714 ~ 16000832 (-) True LOC122343849
XR_006250816.1 other downstream 6994 15998348 ~ 15998466 (-) True LOC122343667
XR_006250815.1 other downstream 8584 15996758 ~ 15996876 (-) True LOC122343656
XR_006250840.1 other upstream 2268 16007846 ~ 16007964 (-) True LOC122343850
XR_006250907.1 other upstream 4255 16009833 ~ 16009951 (-) True LOC122343927
XR_006250813.1 other upstream 5437 16011015 ~ 16011133 (-) True LOC122343643
XR_006250848.1 other upstream 5838 16011416 ~ 16011534 (-) True LOC122343860
XR_006250836.1 other upstream 12080 16017658 ~ 16017776 (-) True LOC122343847

Expression Profile