RNA id: XR_006250907.1



Basic Information


Item Value
RNA id XR_006250907.1
length 119
RNA type rRNA
GC content 0.51
exon number 1
gene id LOC122343927
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 16009833 ~ 16009951 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


acttacggccataccaccctgttcacgcctgatctcgcctgatctcagaagctaagcagagttgggcctggttagtacttggatgggagactgcctaggaataccaggtgctgtaaatt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU42859 lncRNA downstream 80933 15928143 ~ 15928900 (-) True G28897
TU42857 lncRNA downstream 166094 15843405 ~ 15843739 (-) True G28895
TU42849 lncRNA downstream 275950 15733363 ~ 15733883 (-) True G28887
TU42824 lncRNA downstream 354652 15565419 ~ 15655181 (-) True G28870
XR_006250641.1 lncRNA downstream 564604 15443764 ~ 15445229 (-) True LOC122342747
TU42891 lncRNA upstream 368749 16378700 ~ 16383670 (-) True G28916
TU42910 lncRNA upstream 401909 16411860 ~ 16419956 (-) True G28933
TU42913 lncRNA upstream 401909 16411860 ~ 16419956 (-) False G28933
TU42916 lncRNA upstream 402576 16412527 ~ 16420139 (-) True G28935
TU42950 lncRNA upstream 450811 16460762 ~ 16461511 (-) True G28966
XM_043236016.1 mRNA downstream 329715 15674819 ~ 15680118 (-) False tmem19
XM_043236018.1 mRNA downstream 329809 15674819 ~ 15680024 (-) False tmem19
XM_043236017.1 mRNA downstream 329809 15674819 ~ 15680024 (-) True tmem19
XM_043236424.1 mRNA downstream 336599 15664443 ~ 15673234 (-) True zgc:171422
XM_043236426.1 mRNA downstream 345527 15656075 ~ 15664306 (-) False slc37a3
XM_043236543.1 mRNA upstream 467840 16477791 ~ 16483176 (-) True LOC122342598
XM_043237033.1 mRNA upstream 474616 16484567 ~ 16498839 (-) True LOC122342885
XM_043236534.1 mRNA upstream 528029 16537980 ~ 16542902 (-) True LOC122342596
XM_043236544.1 mRNA upstream 563176 16573127 ~ 16593094 (-) True LOC122342599
XM_043237521.1 mRNA upstream 700573 16710524 ~ 16724794 (-) False LOC122343211
XR_006250840.1 other downstream 1869 16007846 ~ 16007964 (-) True LOC122343850
XR_006250889.1 other downstream 4255 16005460 ~ 16005578 (-) True LOC122343907
XR_006250797.1 other downstream 5444 16004271 ~ 16004389 (-) True LOC122343535
XR_006250801.1 other downstream 6627 16003088 ~ 16003206 (-) True LOC122343539
XR_006250839.1 other downstream 9001 16000714 ~ 16000832 (-) True LOC122343849
XR_006250813.1 other upstream 1064 16011015 ~ 16011133 (-) True LOC122343643
XR_006250848.1 other upstream 1465 16011416 ~ 16011534 (-) True LOC122343860
XR_006250836.1 other upstream 7707 16017658 ~ 16017776 (-) True LOC122343847
XR_006250859.1 other upstream 8106 16018057 ~ 16018175 (-) True LOC122343872
XR_006250906.1 other upstream 10090 16020041 ~ 16020159 (-) True LOC122343926

Expression Profile