RNA id: XR_006250908.1



Basic Information


Item Value
RNA id XR_006250908.1
length 119
RNA type rRNA
GC content 0.50
exon number 1
gene id LOC122343928
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 15882501 ~ 15882619 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gtttacggccataccaccctgttcacgcctgatctcgtctgatctcagaagctaagcagagttgggcctagttagtacttggatgggagactgcctaggaataccaggtgctgtaagtt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU42857 lncRNA downstream 38762 15843405 ~ 15843739 (-) True G28895
TU42849 lncRNA downstream 148618 15733363 ~ 15733883 (-) True G28887
TU42824 lncRNA downstream 227320 15565419 ~ 15655181 (-) True G28870
XR_006250641.1 lncRNA downstream 437272 15443764 ~ 15445229 (-) True LOC122342747
TU42788 lncRNA downstream 464263 15416856 ~ 15418238 (-) True G28850
TU42859 lncRNA upstream 45524 15928143 ~ 15928900 (-) True G28897
TU42891 lncRNA upstream 496081 16378700 ~ 16383670 (-) True G28916
TU42910 lncRNA upstream 529241 16411860 ~ 16419956 (-) True G28933
TU42913 lncRNA upstream 529241 16411860 ~ 16419956 (-) False G28933
TU42916 lncRNA upstream 529908 16412527 ~ 16420139 (-) True G28935
XM_043236016.1 mRNA downstream 202383 15674819 ~ 15680118 (-) False tmem19
XM_043236018.1 mRNA downstream 202477 15674819 ~ 15680024 (-) False tmem19
XM_043236017.1 mRNA downstream 202477 15674819 ~ 15680024 (-) True tmem19
XM_043236424.1 mRNA downstream 209267 15664443 ~ 15673234 (-) True zgc:171422
XM_043236426.1 mRNA downstream 218195 15656075 ~ 15664306 (-) False slc37a3
XM_043236543.1 mRNA upstream 595172 16477791 ~ 16483176 (-) True LOC122342598
XM_043237033.1 mRNA upstream 601948 16484567 ~ 16498839 (-) True LOC122342885
XM_043236534.1 mRNA upstream 655361 16537980 ~ 16542902 (-) True LOC122342596
XM_043236544.1 mRNA upstream 690508 16573127 ~ 16593094 (-) True LOC122342599
XM_043237521.1 mRNA upstream 827905 16710524 ~ 16724794 (-) False LOC122343211
XR_006250820.1 other downstream 1863 15880520 ~ 15880638 (-) True LOC122343711
XR_006250819.1 other downstream 2262 15880121 ~ 15880239 (-) True LOC122343700
XR_006250818.1 other downstream 24999 15857384 ~ 15857502 (-) True LOC122343689
XR_006250809.1 other downstream 35414 15846969 ~ 15847087 (-) True LOC122343609
XR_006250613.1 other downstream 270926 15601440 ~ 15611575 (-) False kiaa0930
XR_006250821.1 other upstream 6263 15888882 ~ 15889000 (-) True LOC122343722
XR_006250822.1 other upstream 6660 15889279 ~ 15889397 (-) True LOC122343733
XR_006250823.1 other upstream 7052 15889671 ~ 15889789 (-) True LOC122343746
XR_006250824.1 other upstream 9024 15891643 ~ 15891761 (-) True LOC122343757
XR_006250826.1 other upstream 10203 15892822 ~ 15892940 (-) True LOC122343769

Expression Profile