RNA id: unassigned_transcript_302



Basic Information


Item Value
RNA id unassigned_transcript_302
length 73
RNA type tRNA
GC content 0.50
exon number 2
gene id trnay-gua
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 4764853 ~ 4764940 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CCTTcgatagctcagttggtagagcggaGGACTGTAGATCCTTAGGTCGCTGGTTCGAATCCGGCTCGAAGGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006250557.1 lncRNA downstream 81467 4660825 ~ 4683386 (-) False LOC122342406
XR_006250556.1 lncRNA downstream 81473 4673693 ~ 4683380 (-) True LOC122342406
TU38563 lncRNA downstream 136008 4596863 ~ 4628845 (-) True G25972
TU38559 lncRNA downstream 333761 4430812 ~ 4431092 (-) True G25970
TU38558 lncRNA downstream 334178 4428359 ~ 4430675 (-) True G25969
TU38698 lncRNA upstream 59416 4824356 ~ 4827643 (-) True G26058
TU38708 lncRNA upstream 69082 4834022 ~ 4834465 (-) True G26068
TU38709 lncRNA upstream 71476 4836416 ~ 4836856 (-) True G26069
TU38710 lncRNA upstream 72067 4837007 ~ 4837629 (-) True G26070
TU38711 lncRNA upstream 73401 4838341 ~ 4838731 (-) True G26071
XM_043237994.1 mRNA downstream 7026 4731224 ~ 4757827 (-) False LOC122343492
XM_043237992.1 mRNA downstream 7026 4731224 ~ 4757827 (-) False LOC122343492
XM_043237993.1 mRNA downstream 7089 4731224 ~ 4757764 (-) True LOC122343492
XM_043237990.1 mRNA downstream 35615 4684333 ~ 4729238 (-) False flncb
XM_043237988.1 mRNA downstream 35615 4684333 ~ 4729238 (-) False flncb
XM_043236353.1 mRNA upstream 916 4765856 ~ 4811089 (-) True sbf1
XM_043236351.1 mRNA upstream 916 4765856 ~ 4811052 (-) False sbf1
XM_043236349.1 mRNA upstream 916 4765856 ~ 4811052 (-) False sbf1
XM_043236348.1 mRNA upstream 916 4765856 ~ 4811052 (-) False sbf1
XM_043236350.1 mRNA upstream 916 4765856 ~ 4811052 (-) False sbf1
XR_006250792.1 other downstream 7026 4731224 ~ 4757827 (-) False LOC122343492
TU38442 other downstream 497358 4264926 ~ 4267495 (-) True G25880
TU38194 other downstream 1160583 3602358 ~ 3604270 (-) False LOC122342823
TU38193 other downstream 1162879 3601000 ~ 3601974 (-) False LOC122342822
TU38177 other downstream 1187757 3548226 ~ 3577096 (-) False LOC122342819
unassigned_transcript_303 other upstream 140 4765080 ~ 4765167 (-) True trnay-gua_1
unassigned_transcript_305 other upstream 952106 5717046 ~ 5717133 (-) True trnay-gua_3
TU39166 other upstream 954072 5719012 ~ 5720250 (-) True G26405
TU39169 other upstream 965078 5730018 ~ 5736946 (-) True G26408
TU39171 other upstream 965078 5730018 ~ 5736946 (-) False G26408