RNA id: unassigned_transcript_323



Basic Information


Item Value
RNA id unassigned_transcript_323
length 83
RNA type tRNA
GC content 0.59
exon number 1
gene id trnal-aag_6
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 20072004 ~ 20072086 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GTCaggatggccgagcggtctaaggcgctgcgttaaggtcgcagtctcctctggaggcgtgggttcgaatcccacttctgaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU44310 lncRNA downstream 62292 20000988 ~ 20009712 (-) True LOC122343146
TU44247 lncRNA downstream 91281 19980489 ~ 19980723 (-) True G29853
TU44245 lncRNA downstream 91645 19979957 ~ 19980359 (-) True G29851
TU44240 lncRNA downstream 95863 19975231 ~ 19976141 (-) True G29847
TU44243 lncRNA downstream 98557 19944294 ~ 19973447 (-) True G29849
TU44330 lncRNA upstream 70617 20142703 ~ 20144343 (-) False LOC122343174
XR_006250694.1 lncRNA upstream 70624 20142710 ~ 20144488 (-) True LOC122343174
TU44299 lncRNA upstream 73621 20145707 ~ 20146537 (-) True G29889
TU44303 lncRNA upstream 74528 20146614 ~ 20147299 (-) False G29889
TU44331 lncRNA upstream 80808 20152894 ~ 20153445 (-) True G29900
XM_043237503.1 mRNA downstream 68451 20001093 ~ 20003553 (-) False LOC122343146
XM_043237466.1 mRNA downstream 77408 19990684 ~ 19994596 (-) True LOC122343115
XM_043237364.1 mRNA downstream 81916 19981179 ~ 19990088 (-) False LOC122343058
XM_043236063.1 mRNA upstream 72969 20145055 ~ 20145645 (-) True LOC122342264
XM_043237446.1 mRNA upstream 75849 20147935 ~ 20150658 (-) False LOC122343109
XM_043237445.1 mRNA upstream 75849 20147935 ~ 20150658 (-) True LOC122343109
XM_043237490.1 mRNA upstream 85069 20157155 ~ 20160273 (-) True LOC122343134
XM_043237465.1 mRNA upstream 92623 20164709 ~ 20166414 (-) True LOC122343114
unassigned_transcript_322 other downstream 1048 20070874 ~ 20070956 (-) True trnal-cag_5
unassigned_transcript_320 other downstream 1826 20070096 ~ 20070178 (-) True trnal-aag_5
unassigned_transcript_319 other downstream 2948 20068974 ~ 20069056 (-) True trnal-cag_4
unassigned_transcript_317 other downstream 3727 20068195 ~ 20068277 (-) True trnal-aag_4
unassigned_transcript_316 other downstream 4853 20067070 ~ 20067151 (-) True trnal-cag_3
unassigned_transcript_325 other upstream 700 20072786 ~ 20072868 (-) True trnal-cag_6
unassigned_transcript_326 other upstream 1827 20073913 ~ 20073995 (-) True trnal-aag_7
unassigned_transcript_328 other upstream 2602 20074688 ~ 20074770 (-) True trnal-cag_7
unassigned_transcript_329 other upstream 3730 20075816 ~ 20075898 (-) True trnal-aag_8
unassigned_transcript_331 other upstream 4509 20076595 ~ 20076677 (-) True trnal-cag_8