RNA id: unassigned_transcript_355



Basic Information


Item Value
RNA id unassigned_transcript_355
length 85
RNA type tRNA
GC content 0.61
exon number 1
gene id trnal-aag_16
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 20092765 ~ 20092849 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GTCaggatggccgagcggtctaaggcgcgcTGCGTTAAGGTCGCAGTCTcctctggaggcgtgggttcgaatcccacttctgaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU44310 lncRNA downstream 83053 20000988 ~ 20009712 (-) True LOC122343146
TU44247 lncRNA downstream 112042 19980489 ~ 19980723 (-) True G29853
TU44245 lncRNA downstream 112406 19979957 ~ 19980359 (-) True G29851
TU44240 lncRNA downstream 116624 19975231 ~ 19976141 (-) True G29847
TU44243 lncRNA downstream 119318 19944294 ~ 19973447 (-) True G29849
TU44330 lncRNA upstream 49854 20142703 ~ 20144343 (-) False LOC122343174
XR_006250694.1 lncRNA upstream 49861 20142710 ~ 20144488 (-) True LOC122343174
TU44299 lncRNA upstream 52858 20145707 ~ 20146537 (-) True G29889
TU44303 lncRNA upstream 53765 20146614 ~ 20147299 (-) False G29889
TU44331 lncRNA upstream 60045 20152894 ~ 20153445 (-) True G29900
XM_043237503.1 mRNA downstream 89212 20001093 ~ 20003553 (-) False LOC122343146
XM_043237466.1 mRNA downstream 98169 19990684 ~ 19994596 (-) True LOC122343115
XM_043237364.1 mRNA downstream 102677 19981179 ~ 19990088 (-) False LOC122343058
XM_043236063.1 mRNA upstream 52206 20145055 ~ 20145645 (-) True LOC122342264
XM_043237446.1 mRNA upstream 55086 20147935 ~ 20150658 (-) False LOC122343109
XM_043237445.1 mRNA upstream 55086 20147935 ~ 20150658 (-) True LOC122343109
XM_043237490.1 mRNA upstream 64306 20157155 ~ 20160273 (-) True LOC122343134
XM_043237465.1 mRNA upstream 71860 20164709 ~ 20166414 (-) True LOC122343114
unassigned_transcript_354 other downstream 1045 20091638 ~ 20091720 (-) True trnal-cag_16
unassigned_transcript_352 other downstream 1825 20090861 ~ 20090940 (-) True trnal-aag_15
unassigned_transcript_351 other downstream 2949 20089734 ~ 20089816 (-) True trnal-cag_15
unassigned_transcript_349 other downstream 3728 20088955 ~ 20089037 (-) True trnal-aag_14
unassigned_transcript_348 other downstream 4856 20087827 ~ 20087909 (-) True trnal-cag_14
unassigned_transcript_357 other upstream 698 20093547 ~ 20093629 (-) True trnal-cag_17
unassigned_transcript_358 other upstream 1825 20094674 ~ 20094756 (-) True trnal-aag_17
unassigned_transcript_360 other upstream 2606 20095455 ~ 20095537 (-) True trnal-cag_18
unassigned_transcript_361 other upstream 3732 20096581 ~ 20096663 (-) True trnal-aag_18
unassigned_transcript_363 other upstream 4510 20097359 ~ 20097441 (-) True trnal-cag_19