RNA id: unassigned_transcript_358



Basic Information


Item Value
RNA id unassigned_transcript_358
length 83
RNA type tRNA
GC content 0.60
exon number 1
gene id trnal-aag_17
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 20094674 ~ 20094756 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GTCaggatggccgagcggtctaaggcgctgcgttaaggtcgcagtctcctctggaggcgtgggttcgaatcccacttctgaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU44310 lncRNA downstream 84962 20000988 ~ 20009712 (-) True LOC122343146
TU44247 lncRNA downstream 113951 19980489 ~ 19980723 (-) True G29853
TU44245 lncRNA downstream 114315 19979957 ~ 19980359 (-) True G29851
TU44240 lncRNA downstream 118533 19975231 ~ 19976141 (-) True G29847
TU44243 lncRNA downstream 121227 19944294 ~ 19973447 (-) True G29849
TU44330 lncRNA upstream 47947 20142703 ~ 20144343 (-) False LOC122343174
XR_006250694.1 lncRNA upstream 47954 20142710 ~ 20144488 (-) True LOC122343174
TU44299 lncRNA upstream 50951 20145707 ~ 20146537 (-) True G29889
TU44303 lncRNA upstream 51858 20146614 ~ 20147299 (-) False G29889
TU44331 lncRNA upstream 58138 20152894 ~ 20153445 (-) True G29900
XM_043237503.1 mRNA downstream 91121 20001093 ~ 20003553 (-) False LOC122343146
XM_043237466.1 mRNA downstream 100078 19990684 ~ 19994596 (-) True LOC122343115
XM_043237364.1 mRNA downstream 104586 19981179 ~ 19990088 (-) False LOC122343058
XM_043236063.1 mRNA upstream 50299 20145055 ~ 20145645 (-) True LOC122342264
XM_043237446.1 mRNA upstream 53179 20147935 ~ 20150658 (-) False LOC122343109
XM_043237445.1 mRNA upstream 53179 20147935 ~ 20150658 (-) True LOC122343109
XM_043237490.1 mRNA upstream 62399 20157155 ~ 20160273 (-) True LOC122343134
XM_043237465.1 mRNA upstream 69953 20164709 ~ 20166414 (-) True LOC122343114
unassigned_transcript_357 other downstream 1045 20093547 ~ 20093629 (-) True trnal-cag_17
unassigned_transcript_355 other downstream 1825 20092765 ~ 20092849 (-) True trnal-aag_16
unassigned_transcript_354 other downstream 2954 20091638 ~ 20091720 (-) True trnal-cag_16
unassigned_transcript_352 other downstream 3734 20090861 ~ 20090940 (-) True trnal-aag_15
unassigned_transcript_351 other downstream 4858 20089734 ~ 20089816 (-) True trnal-cag_15
unassigned_transcript_360 other upstream 699 20095455 ~ 20095537 (-) True trnal-cag_18
unassigned_transcript_361 other upstream 1825 20096581 ~ 20096663 (-) True trnal-aag_18
unassigned_transcript_363 other upstream 2603 20097359 ~ 20097441 (-) True trnal-cag_19
unassigned_transcript_364 other upstream 3729 20098485 ~ 20098567 (-) True trnal-aag_19
unassigned_transcript_366 other upstream 4508 20099264 ~ 20099346 (-) True trnal-cag_20