RNA id: unassigned_transcript_369



Basic Information


Item Value
RNA id unassigned_transcript_369
length 83
RNA type tRNA
GC content 0.61
exon number 1
gene id trnal-cag_21
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 20101167 ~ 20101249 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gtcaggatggccgagcggtctaaggcgctgcgttcaggtcgcagtctcctctggaggcgtgggttcgaatcccacttctgaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU44310 lncRNA downstream 91455 20000988 ~ 20009712 (-) True LOC122343146
TU44247 lncRNA downstream 120444 19980489 ~ 19980723 (-) True G29853
TU44245 lncRNA downstream 120808 19979957 ~ 19980359 (-) True G29851
TU44240 lncRNA downstream 125026 19975231 ~ 19976141 (-) True G29847
TU44243 lncRNA downstream 127720 19944294 ~ 19973447 (-) True G29849
TU44330 lncRNA upstream 41454 20142703 ~ 20144343 (-) False LOC122343174
XR_006250694.1 lncRNA upstream 41461 20142710 ~ 20144488 (-) True LOC122343174
TU44299 lncRNA upstream 44458 20145707 ~ 20146537 (-) True G29889
TU44303 lncRNA upstream 45365 20146614 ~ 20147299 (-) False G29889
TU44331 lncRNA upstream 51645 20152894 ~ 20153445 (-) True G29900
XM_043237503.1 mRNA downstream 97614 20001093 ~ 20003553 (-) False LOC122343146
XM_043237466.1 mRNA downstream 106571 19990684 ~ 19994596 (-) True LOC122343115
XM_043237364.1 mRNA downstream 111079 19981179 ~ 19990088 (-) False LOC122343058
XM_043236063.1 mRNA upstream 43806 20145055 ~ 20145645 (-) True LOC122342264
XM_043237446.1 mRNA upstream 46686 20147935 ~ 20150658 (-) False LOC122343109
XM_043237445.1 mRNA upstream 46686 20147935 ~ 20150658 (-) True LOC122343109
XM_043237490.1 mRNA upstream 55906 20157155 ~ 20160273 (-) True LOC122343134
XM_043237465.1 mRNA upstream 63460 20164709 ~ 20166414 (-) True LOC122343114
unassigned_transcript_367 other downstream 696 20100389 ~ 20100471 (-) True trnal-aag_20
unassigned_transcript_366 other downstream 1821 20099264 ~ 20099346 (-) True trnal-cag_20
unassigned_transcript_364 other downstream 2600 20098485 ~ 20098567 (-) True trnal-aag_19
unassigned_transcript_363 other downstream 3726 20097359 ~ 20097441 (-) True trnal-cag_19
unassigned_transcript_361 other downstream 4504 20096581 ~ 20096663 (-) True trnal-aag_18
unassigned_transcript_370 other upstream 1044 20102293 ~ 20102375 (-) True trnal-aag_21
unassigned_transcript_372 other upstream 1825 20103074 ~ 20103156 (-) True trnal-cag_22
unassigned_transcript_373 other upstream 2950 20104199 ~ 20104281 (-) True trnal-aag_22
unassigned_transcript_375 other upstream 3728 20104977 ~ 20105059 (-) True trnal-cag_23
unassigned_transcript_376 other upstream 4856 20106105 ~ 20106187 (-) True trnal-aag_23