RNA id: unassigned_transcript_382



Basic Information


Item Value
RNA id unassigned_transcript_382
length 82
RNA type tRNA
GC content 0.59
exon number 1
gene id trnal-aag_26
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 20212462 ~ 20212543 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GTCaggatggccgagcggtctaaggtgCTGCGTTAAGGTCGCAGTCTcctctggaggcgtgggttcaatcccacttctgaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU44325 lncRNA downstream 16035 20045114 ~ 20196427 (-) True G29896
TU44331 lncRNA downstream 59017 20152894 ~ 20153445 (-) True G29900
TU44303 lncRNA downstream 65163 20146614 ~ 20147299 (-) False G29889
TU44299 lncRNA downstream 65925 20145707 ~ 20146537 (-) True G29889
XR_006250694.1 lncRNA downstream 67974 20142710 ~ 20144488 (-) True LOC122343174
TU44337 lncRNA upstream 58563 20271106 ~ 20272289 (-) True G29905
TU44345 lncRNA upstream 90570 20303113 ~ 20311182 (-) True LOC122343168
XR_006250688.1 lncRNA upstream 90664 20303207 ~ 20311190 (-) False LOC122343168
TU44344 lncRNA upstream 97376 20309919 ~ 20311182 (-) False LOC122343168
TU44789 lncRNA upstream 109031 20321574 ~ 20440841 (-) True G30238
XM_043237465.1 mRNA downstream 46048 20164709 ~ 20166414 (-) True LOC122343114
XM_043237490.1 mRNA downstream 52189 20157155 ~ 20160273 (-) True LOC122343134
XM_043237446.1 mRNA downstream 61804 20147935 ~ 20150658 (-) False LOC122343109
XM_043237445.1 mRNA downstream 61804 20147935 ~ 20150658 (-) True LOC122343109
XM_043236063.1 mRNA downstream 66817 20145055 ~ 20145645 (-) True LOC122342264
XM_043236066.1 mRNA upstream 29072 20241615 ~ 20251885 (-) True LOC122342268
XM_043237375.1 mRNA upstream 51117 20263660 ~ 20266849 (-) False LOC122343064
XM_043237374.1 mRNA upstream 51117 20263660 ~ 20266849 (-) True LOC122343064
XM_043237276.1 mRNA upstream 54418 20266961 ~ 20269906 (-) True LOC122343007
XM_043237449.1 mRNA upstream 117904 20330447 ~ 20333281 (-) True LOC122343112
unassigned_transcript_381 other downstream 1824 20210556 ~ 20210638 (-) True trnal-aag_25
unassigned_transcript_380 other downstream 104723 20107657 ~ 20107739 (-) True trnal-cag_24
unassigned_transcript_378 other downstream 105503 20106877 ~ 20106959 (-) True trnal-aag_24
unassigned_transcript_376 other downstream 106275 20106105 ~ 20106187 (-) True trnal-aag_23
unassigned_transcript_375 other downstream 107403 20104977 ~ 20105059 (-) True trnal-cag_23
unassigned_transcript_383 other upstream 698 20213241 ~ 20213322 (-) True trnal-cag_25
unassigned_transcript_384 other upstream 1706 20214249 ~ 20214332 (-) True trnal-aag_27
unassigned_transcript_385 other upstream 3617 20216160 ~ 20216239 (-) True trnal-aag_28
TU44333 other upstream 24594 20237137 ~ 20238554 (-) True G29902
TU44338 other upstream 68563 20281106 ~ 20282400 (-) True G29906