RNA id: unassigned_transcript_495



Basic Information


Item Value
RNA id unassigned_transcript_495
length 82
RNA type tRNA
GC content 0.61
exon number 1
gene id trnas-cga
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26017328 ~ 26017409 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gtagtcgtggccgagaggttaaggcgatggactcgaaatccattggggtctccccgcgcaggttcgaaccctgccgactacg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006250768.1 lncRNA downstream 97918 25918811 ~ 25919410 (-) True LOC122343400
TU46348 lncRNA downstream 101371 25915697 ~ 25915957 (-) True G31390
TU46342 lncRNA downstream 202103 25813904 ~ 25815225 (-) True G31387
TU46340 lncRNA downstream 203713 25812640 ~ 25813615 (-) True G31385
TU46336 lncRNA downstream 229453 25787380 ~ 25787875 (-) True G31381
XR_006250568.1 lncRNA upstream 3139 26020548 ~ 26021384 (-) True LOC122342449
TU46357 lncRNA upstream 220511 26237920 ~ 26238238 (-) True G31399
XR_006250605.1 lncRNA upstream 286253 26303662 ~ 26304672 (-) True LOC122342589
TU46360 lncRNA upstream 410743 26428152 ~ 26433786 (-) True G31402
TU46371 lncRNA upstream 461307 26478716 ~ 26478933 (-) True G31413
XM_043236136.1 mRNA downstream 61707 25952760 ~ 25955621 (-) True LOC122342356
XM_043237668.1 mRNA downstream 238807 25762532 ~ 25778521 (-) True hm13
XM_043237669.1 mRNA downstream 238809 25762532 ~ 25778519 (-) False hm13
XM_043236861.1 mRNA downstream 255723 25741596 ~ 25761605 (-) True si:ch73-181d5.4
XM_043236267.1 mRNA downstream 276415 25728094 ~ 25740913 (-) True LOC122342461
XM_043236138.1 mRNA upstream 4735 26022144 ~ 26023244 (-) True LOC122342358
XM_043236140.1 mRNA upstream 6528 26023937 ~ 26026107 (-) True LOC122342359
XM_043236143.1 mRNA upstream 672575 26689984 ~ 26691677 (-) True LOC122342363
XM_043236144.1 mRNA upstream 675212 26692621 ~ 26693546 (-) True LOC122342364
XM_043236146.1 mRNA upstream 848364 26865773 ~ 26869148 (-) True LOC122342367
unassigned_transcript_494 other downstream 6386 26010870 ~ 26010942 (-) True trnak-uuu_30
unassigned_transcript_493 other downstream 7521 26009727 ~ 26009807 (-) True trnas-uga_38
unassigned_transcript_491 other downstream 9826 26007421 ~ 26007502 (-) True trnas-aga_35
unassigned_transcript_490 other downstream 10173 26007074 ~ 26007155 (-) True trnas-uga_37
unassigned_transcript_489 other downstream 12105 26005143 ~ 26005223 (-) True trnas-aga_34
unassigned_transcript_496 other upstream 13394 26030803 ~ 26030875 (-) True trnak-uuu_31
unassigned_transcript_497 other upstream 13708 26031117 ~ 26031188 (-) True trnah-gug_4
unassigned_transcript_499 other upstream 14892 26032301 ~ 26032381 (-) True trnas-uga_39
unassigned_transcript_500 other upstream 15233 26032642 ~ 26032722 (-) True trnas-aga_36
unassigned_transcript_501 other upstream 17887 26035296 ~ 26035375 (-) True trnas-aga_37