RNA id: unassigned_transcript_496



Basic Information


Item Value
RNA id unassigned_transcript_496
length 73
RNA type tRNA
GC content 0.55
exon number 1
gene id trnak-uuu_31
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26030803 ~ 26030875 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gcctggatagctcagtcggtagagcatcagacttttaatctgagggtccagggttcaagtccctgttcgggcg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006250568.1 lncRNA downstream 9419 26020548 ~ 26021384 (-) True LOC122342449
XR_006250768.1 lncRNA downstream 111393 25918811 ~ 25919410 (-) True LOC122343400
TU46348 lncRNA downstream 114846 25915697 ~ 25915957 (-) True G31390
TU46342 lncRNA downstream 215578 25813904 ~ 25815225 (-) True G31387
TU46340 lncRNA downstream 217188 25812640 ~ 25813615 (-) True G31385
TU46357 lncRNA upstream 207045 26237920 ~ 26238238 (-) True G31399
XR_006250605.1 lncRNA upstream 272787 26303662 ~ 26304672 (-) True LOC122342589
TU46360 lncRNA upstream 397277 26428152 ~ 26433786 (-) True G31402
TU46371 lncRNA upstream 447841 26478716 ~ 26478933 (-) True G31413
XR_006250546.1 lncRNA upstream 657738 26688613 ~ 26689452 (-) True LOC122342214
XM_043236140.1 mRNA downstream 4696 26023937 ~ 26026107 (-) True LOC122342359
XM_043236138.1 mRNA downstream 7559 26022144 ~ 26023244 (-) True LOC122342358
XM_043236136.1 mRNA downstream 75182 25952760 ~ 25955621 (-) True LOC122342356
XM_043237668.1 mRNA downstream 252282 25762532 ~ 25778521 (-) True hm13
XM_043237669.1 mRNA downstream 252284 25762532 ~ 25778519 (-) False hm13
XM_043236143.1 mRNA upstream 659109 26689984 ~ 26691677 (-) True LOC122342363
XM_043236144.1 mRNA upstream 661746 26692621 ~ 26693546 (-) True LOC122342364
XM_043236146.1 mRNA upstream 834898 26865773 ~ 26869148 (-) True LOC122342367
XM_043236245.1 mRNA upstream 1352878 27383753 ~ 27389398 (-) True LOC122342454
XM_043238050.1 mRNA upstream 1378213 27409088 ~ 27415650 (-) True flot1a
unassigned_transcript_495 other downstream 13394 26017328 ~ 26017409 (-) True trnas-cga
unassigned_transcript_494 other downstream 19861 26010870 ~ 26010942 (-) True trnak-uuu_30
unassigned_transcript_493 other downstream 20996 26009727 ~ 26009807 (-) True trnas-uga_38
unassigned_transcript_491 other downstream 23301 26007421 ~ 26007502 (-) True trnas-aga_35
unassigned_transcript_490 other downstream 23648 26007074 ~ 26007155 (-) True trnas-uga_37
unassigned_transcript_497 other upstream 242 26031117 ~ 26031188 (-) True trnah-gug_4
unassigned_transcript_499 other upstream 1426 26032301 ~ 26032381 (-) True trnas-uga_39
unassigned_transcript_500 other upstream 1767 26032642 ~ 26032722 (-) True trnas-aga_36
unassigned_transcript_501 other upstream 4421 26035296 ~ 26035375 (-) True trnas-aga_37
unassigned_transcript_502 other upstream 5229 26036104 ~ 26036176 (-) True trnak-uuu_32