RNA id: unassigned_transcript_559



Basic Information


Item Value
RNA id unassigned_transcript_559
length 73
RNA type tRNA
GC content 0.55
exon number 1
gene id trnaa-agc_7
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26097181 ~ 26097253 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggggaattagctcaaatggtagagcgctcgcttagcatgcgagaggtagtgggatcgatgcccgcattctcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006250568.1 lncRNA downstream 75797 26020548 ~ 26021384 (-) True LOC122342449
XR_006250768.1 lncRNA downstream 177771 25918811 ~ 25919410 (-) True LOC122343400
TU46348 lncRNA downstream 181224 25915697 ~ 25915957 (-) True G31390
TU46342 lncRNA downstream 281956 25813904 ~ 25815225 (-) True G31387
TU46340 lncRNA downstream 283566 25812640 ~ 25813615 (-) True G31385
TU46357 lncRNA upstream 140667 26237920 ~ 26238238 (-) True G31399
XR_006250605.1 lncRNA upstream 206409 26303662 ~ 26304672 (-) True LOC122342589
TU46360 lncRNA upstream 330899 26428152 ~ 26433786 (-) True G31402
TU46371 lncRNA upstream 381463 26478716 ~ 26478933 (-) True G31413
XR_006250546.1 lncRNA upstream 591360 26688613 ~ 26689452 (-) True LOC122342214
XM_043236140.1 mRNA downstream 71074 26023937 ~ 26026107 (-) True LOC122342359
XM_043236138.1 mRNA downstream 73937 26022144 ~ 26023244 (-) True LOC122342358
XM_043236136.1 mRNA downstream 141560 25952760 ~ 25955621 (-) True LOC122342356
XM_043237668.1 mRNA downstream 318660 25762532 ~ 25778521 (-) True hm13
XM_043236143.1 mRNA upstream 592731 26689984 ~ 26691677 (-) True LOC122342363
XM_043236144.1 mRNA upstream 595368 26692621 ~ 26693546 (-) True LOC122342364
XM_043236146.1 mRNA upstream 768520 26865773 ~ 26869148 (-) True LOC122342367
XM_043236245.1 mRNA upstream 1286500 27383753 ~ 27389398 (-) True LOC122342454
XM_043238050.1 mRNA upstream 1311835 27409088 ~ 27415650 (-) True flot1a
unassigned_transcript_553 other downstream 6914 26090195 ~ 26090267 (-) True trnaa-agc_6
unassigned_transcript_547 other downstream 12570 26084539 ~ 26084611 (-) True trnaa-agc_5
unassigned_transcript_504 other downstream 59145 26037955 ~ 26038036 (-) True trnas-aga_38
unassigned_transcript_503 other downstream 60692 26036418 ~ 26036489 (-) True trnah-gug_5
unassigned_transcript_502 other downstream 61005 26036104 ~ 26036176 (-) True trnak-uuu_32
unassigned_transcript_591 other upstream 35277 26132530 ~ 26132602 (-) True trnaa-agc_8
unassigned_transcript_610 other upstream 58606 26155859 ~ 26155931 (-) True trnaa-agc_9
XR_006250903.1 other upstream 69932 26167185 ~ 26167290 (-) True LOC122343923
unassigned_transcript_615 other upstream 71150 26168403 ~ 26168482 (-) True trnas-gcu
unassigned_transcript_616 other upstream 71371 26168624 ~ 26168695 (-) True trnap-agg_2