RNA id: unassigned_transcript_683



Basic Information


Item Value
RNA id unassigned_transcript_683
length 75
RNA type tRNA
GC content 0.59
exon number 1
gene id trnar-acg_10
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26259623 ~ 26259697 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gggccagtggcgcaatggataacgcgcgtctgactacggatcagaagattctaggttcgactcctggctggctcg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46357 lncRNA downstream 21385 26237920 ~ 26238238 (-) True G31399
XR_006250568.1 lncRNA downstream 238239 26020548 ~ 26021384 (-) True LOC122342449
XR_006250768.1 lncRNA downstream 340213 25918811 ~ 25919410 (-) True LOC122343400
TU46348 lncRNA downstream 343666 25915697 ~ 25915957 (-) True G31390
TU46342 lncRNA downstream 444398 25813904 ~ 25815225 (-) True G31387
XR_006250605.1 lncRNA upstream 43965 26303662 ~ 26304672 (-) True LOC122342589
TU46360 lncRNA upstream 168455 26428152 ~ 26433786 (-) True G31402
TU46371 lncRNA upstream 219019 26478716 ~ 26478933 (-) True G31413
XR_006250546.1 lncRNA upstream 428916 26688613 ~ 26689452 (-) True LOC122342214
XR_006250601.1 lncRNA upstream 471963 26731660 ~ 26732626 (-) True LOC122342580
XM_043236140.1 mRNA downstream 233516 26023937 ~ 26026107 (-) True LOC122342359
XM_043236138.1 mRNA downstream 236379 26022144 ~ 26023244 (-) True LOC122342358
XM_043236136.1 mRNA downstream 304002 25952760 ~ 25955621 (-) True LOC122342356
XM_043237668.1 mRNA downstream 481102 25762532 ~ 25778521 (-) True hm13
XM_043236143.1 mRNA upstream 430287 26689984 ~ 26691677 (-) True LOC122342363
XM_043236144.1 mRNA upstream 432924 26692621 ~ 26693546 (-) True LOC122342364
XM_043236146.1 mRNA upstream 606076 26865773 ~ 26869148 (-) True LOC122342367
XM_043236245.1 mRNA upstream 1124056 27383753 ~ 27389398 (-) True LOC122342454
XM_043238050.1 mRNA upstream 1149391 27409088 ~ 27415650 (-) True flot1a
unassigned_transcript_682 other downstream 3237 26256313 ~ 26256386 (-) True trnar-acg_9
unassigned_transcript_681 other downstream 3592 26255960 ~ 26256031 (-) True trnae-uuc_6
unassigned_transcript_679 other downstream 4641 26254910 ~ 26254982 (-) True trnar-acg_8
unassigned_transcript_678 other downstream 5188 26254349 ~ 26254435 (-) True trnay-gua_11
unassigned_transcript_676 other downstream 13176 26246361 ~ 26246447 (-) True trnay-gua_10
unassigned_transcript_684 other upstream 1325 26261022 ~ 26261094 (-) True trnar-acg_11
unassigned_transcript_685 other upstream 3223 26262920 ~ 26262993 (-) True trnar-acg_12
unassigned_transcript_686 other upstream 4078 26263775 ~ 26263861 (-) True trnay-gua_12
unassigned_transcript_687 other upstream 4290 26263987 ~ 26264058 (-) True trnae-uuc_7
unassigned_transcript_688 other upstream 5705 26265402 ~ 26265473 (-) True trnae-uuc_8