RNA id: unassigned_transcript_685



Basic Information


Item Value
RNA id unassigned_transcript_685
length 74
RNA type tRNA
GC content 0.57
exon number 1
gene id trnar-acg_12
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26262920 ~ 26262993 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gggccagtggcgcaatggataacgcgtctgactacggatcagaagattctaggttcgactctctggctggctcg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46357 lncRNA downstream 24682 26237920 ~ 26238238 (-) True G31399
XR_006250568.1 lncRNA downstream 241536 26020548 ~ 26021384 (-) True LOC122342449
XR_006250768.1 lncRNA downstream 343510 25918811 ~ 25919410 (-) True LOC122343400
TU46348 lncRNA downstream 346963 25915697 ~ 25915957 (-) True G31390
TU46342 lncRNA downstream 447695 25813904 ~ 25815225 (-) True G31387
XR_006250605.1 lncRNA upstream 40669 26303662 ~ 26304672 (-) True LOC122342589
TU46360 lncRNA upstream 165159 26428152 ~ 26433786 (-) True G31402
TU46371 lncRNA upstream 215723 26478716 ~ 26478933 (-) True G31413
XR_006250546.1 lncRNA upstream 425620 26688613 ~ 26689452 (-) True LOC122342214
XR_006250601.1 lncRNA upstream 468667 26731660 ~ 26732626 (-) True LOC122342580
XM_043236140.1 mRNA downstream 236813 26023937 ~ 26026107 (-) True LOC122342359
XM_043236138.1 mRNA downstream 239676 26022144 ~ 26023244 (-) True LOC122342358
XM_043236136.1 mRNA downstream 307299 25952760 ~ 25955621 (-) True LOC122342356
XM_043237668.1 mRNA downstream 484399 25762532 ~ 25778521 (-) True hm13
XM_043236143.1 mRNA upstream 426991 26689984 ~ 26691677 (-) True LOC122342363
XM_043236144.1 mRNA upstream 429628 26692621 ~ 26693546 (-) True LOC122342364
XM_043236146.1 mRNA upstream 602780 26865773 ~ 26869148 (-) True LOC122342367
XM_043236245.1 mRNA upstream 1120760 27383753 ~ 27389398 (-) True LOC122342454
XM_043238050.1 mRNA upstream 1146095 27409088 ~ 27415650 (-) True flot1a
unassigned_transcript_684 other downstream 1826 26261022 ~ 26261094 (-) True trnar-acg_11
unassigned_transcript_683 other downstream 3223 26259623 ~ 26259697 (-) True trnar-acg_10
unassigned_transcript_682 other downstream 6534 26256313 ~ 26256386 (-) True trnar-acg_9
unassigned_transcript_681 other downstream 6889 26255960 ~ 26256031 (-) True trnae-uuc_6
unassigned_transcript_679 other downstream 7938 26254910 ~ 26254982 (-) True trnar-acg_8
unassigned_transcript_686 other upstream 782 26263775 ~ 26263861 (-) True trnay-gua_12
unassigned_transcript_687 other upstream 994 26263987 ~ 26264058 (-) True trnae-uuc_7
unassigned_transcript_688 other upstream 2409 26265402 ~ 26265473 (-) True trnae-uuc_8
unassigned_transcript_689 other upstream 2762 26265755 ~ 26265827 (-) True trnar-acg_13
unassigned_transcript_691 other upstream 4299 26267292 ~ 26267363 (-) True trnae-uuc_9