RNA id: unassigned_transcript_686



Basic Information


Item Value
RNA id unassigned_transcript_686
length 73
RNA type tRNA
GC content 0.56
exon number 2
gene id trnay-gua_12
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26263775 ~ 26263861 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CCTTcgatagctcagttggtagagcggaggactgtagatccttaggtcgctggttcgactccggctcgaagga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46357 lncRNA downstream 25537 26237920 ~ 26238238 (-) True G31399
XR_006250568.1 lncRNA downstream 242391 26020548 ~ 26021384 (-) True LOC122342449
XR_006250768.1 lncRNA downstream 344365 25918811 ~ 25919410 (-) True LOC122343400
TU46348 lncRNA downstream 347818 25915697 ~ 25915957 (-) True G31390
TU46342 lncRNA downstream 448550 25813904 ~ 25815225 (-) True G31387
XR_006250605.1 lncRNA upstream 39801 26303662 ~ 26304672 (-) True LOC122342589
TU46360 lncRNA upstream 164291 26428152 ~ 26433786 (-) True G31402
TU46371 lncRNA upstream 214855 26478716 ~ 26478933 (-) True G31413
XR_006250546.1 lncRNA upstream 424752 26688613 ~ 26689452 (-) True LOC122342214
XR_006250601.1 lncRNA upstream 467799 26731660 ~ 26732626 (-) True LOC122342580
XM_043236140.1 mRNA downstream 237668 26023937 ~ 26026107 (-) True LOC122342359
XM_043236138.1 mRNA downstream 240531 26022144 ~ 26023244 (-) True LOC122342358
XM_043236136.1 mRNA downstream 308154 25952760 ~ 25955621 (-) True LOC122342356
XM_043237668.1 mRNA downstream 485254 25762532 ~ 25778521 (-) True hm13
XM_043236143.1 mRNA upstream 426123 26689984 ~ 26691677 (-) True LOC122342363
XM_043236144.1 mRNA upstream 428760 26692621 ~ 26693546 (-) True LOC122342364
XM_043236146.1 mRNA upstream 601912 26865773 ~ 26869148 (-) True LOC122342367
XM_043236245.1 mRNA upstream 1119892 27383753 ~ 27389398 (-) True LOC122342454
XM_043238050.1 mRNA upstream 1145227 27409088 ~ 27415650 (-) True flot1a
unassigned_transcript_685 other downstream 782 26262920 ~ 26262993 (-) True trnar-acg_12
unassigned_transcript_684 other downstream 2681 26261022 ~ 26261094 (-) True trnar-acg_11
unassigned_transcript_683 other downstream 4078 26259623 ~ 26259697 (-) True trnar-acg_10
unassigned_transcript_682 other downstream 7389 26256313 ~ 26256386 (-) True trnar-acg_9
unassigned_transcript_681 other downstream 7744 26255960 ~ 26256031 (-) True trnae-uuc_6
unassigned_transcript_687 other upstream 126 26263987 ~ 26264058 (-) True trnae-uuc_7
unassigned_transcript_688 other upstream 1541 26265402 ~ 26265473 (-) True trnae-uuc_8
unassigned_transcript_689 other upstream 1894 26265755 ~ 26265827 (-) True trnar-acg_13
unassigned_transcript_691 other upstream 3431 26267292 ~ 26267363 (-) True trnae-uuc_9
unassigned_transcript_693 other upstream 4819 26268680 ~ 26268751 (-) True trnae-uuc_10