RNA id: unassigned_transcript_701



Basic Information


Item Value
RNA id unassigned_transcript_701
length 72
RNA type tRNA
GC content 0.57
exon number 1
gene id trnae-uuc_12
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26271517 ~ 26271588 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCCCATATGGTCTAGCGGTGAGGattcctggttttcacccaggCGGCCTGGGTTCGACTCCCGGTATGTgaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46357 lncRNA downstream 33279 26237920 ~ 26238238 (-) True G31399
XR_006250568.1 lncRNA downstream 250133 26020548 ~ 26021384 (-) True LOC122342449
XR_006250768.1 lncRNA downstream 352107 25918811 ~ 25919410 (-) True LOC122343400
TU46348 lncRNA downstream 355560 25915697 ~ 25915957 (-) True G31390
TU46342 lncRNA downstream 456292 25813904 ~ 25815225 (-) True G31387
XR_006250605.1 lncRNA upstream 32074 26303662 ~ 26304672 (-) True LOC122342589
TU46360 lncRNA upstream 156564 26428152 ~ 26433786 (-) True G31402
TU46371 lncRNA upstream 207128 26478716 ~ 26478933 (-) True G31413
XR_006250546.1 lncRNA upstream 417025 26688613 ~ 26689452 (-) True LOC122342214
XR_006250601.1 lncRNA upstream 460072 26731660 ~ 26732626 (-) True LOC122342580
XM_043236140.1 mRNA downstream 245410 26023937 ~ 26026107 (-) True LOC122342359
XM_043236138.1 mRNA downstream 248273 26022144 ~ 26023244 (-) True LOC122342358
XM_043236136.1 mRNA downstream 315896 25952760 ~ 25955621 (-) True LOC122342356
XM_043237668.1 mRNA downstream 492996 25762532 ~ 25778521 (-) True hm13
XM_043236143.1 mRNA upstream 418396 26689984 ~ 26691677 (-) True LOC122342363
XM_043236144.1 mRNA upstream 421033 26692621 ~ 26693546 (-) True LOC122342364
XM_043236146.1 mRNA upstream 594185 26865773 ~ 26869148 (-) True LOC122342367
XM_043236245.1 mRNA upstream 1112165 27383753 ~ 27389398 (-) True LOC122342454
XM_043238050.1 mRNA upstream 1137500 27409088 ~ 27415650 (-) True flot1a
unassigned_transcript_700 other downstream 126 26271305 ~ 26271391 (-) True trnay-gua_14
unassigned_transcript_698 other downstream 993 26270452 ~ 26270524 (-) True trnar-acg_15
unassigned_transcript_697 other downstream 1347 26270099 ~ 26270170 (-) True trnae-uuc_11
unassigned_transcript_696 other downstream 1544 26269887 ~ 26269973 (-) True trnay-gua_13
unassigned_transcript_694 other downstream 2412 26269033 ~ 26269105 (-) True trnar-acg_14
unassigned_transcript_703 other upstream 928 26272516 ~ 26272602 (-) True trnay-gua_15
unassigned_transcript_704 other upstream 1487 26273075 ~ 26273147 (-) True trnar-acg_16
unassigned_transcript_705 other upstream 5259 26276847 ~ 26276933 (-) True trnay-gua_16
unassigned_transcript_706 other upstream 5471 26277059 ~ 26277130 (-) True trnae-uuc_13
unassigned_transcript_707 other upstream 5819 26277407 ~ 26277481 (-) True trnar-acg_17

Expression Profile