RNA id: unassigned_transcript_710



Basic Information


Item Value
RNA id unassigned_transcript_710
length 72
RNA type tRNA
GC content 0.63
exon number 1
gene id trnae-cuc_23
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26281974 ~ 26282045 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTCTCACCACCGcggcccgggttcgattcctggtcagggaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006250570.1 lncRNA upstream 118577 26161491 ~ 26163397 (+) True LOC122342452
XR_006250606.1 lncRNA upstream 364775 25916389 ~ 25917199 (+) True LOC122342592
TU46343 lncRNA upstream 464410 25817071 ~ 25817564 (+) True G31388
TU46346 lncRNA upstream 464519 25817031 ~ 25817455 (+) False G31388
TU46361 lncRNA downstream 154303 26436348 ~ 26436599 (+) True G31403
TU46362 lncRNA downstream 161461 26443506 ~ 26443991 (+) True G31404
TU46370 lncRNA downstream 196671 26478716 ~ 26478933 (+) True G31412
XR_006250760.1 lncRNA downstream 486886 26768931 ~ 26769820 (+) True LOC122343359
TU46380 lncRNA downstream 497248 26779293 ~ 26779606 (+) True G31420
XM_043236141.1 mRNA upstream 104356 26173194 ~ 26177618 (+) True LOC122342360
XM_043236137.1 mRNA upstream 304351 25974877 ~ 25977623 (+) True LOC122342357
XM_043236264.1 mRNA upstream 553323 25711662 ~ 25728651 (+) True col9a3
XM_043237791.1 mRNA upstream 572337 25703831 ~ 25709637 (+) True ogfr
XM_043236142.1 mRNA downstream 100871 26382916 ~ 26427239 (+) True LOC122342362
XM_043236145.1 mRNA downstream 482908 26764953 ~ 26767173 (+) True LOC122342366
XM_043236148.1 mRNA downstream 722656 27004701 ~ 27006306 (+) True LOC122342369
XM_043236149.1 mRNA downstream 925691 27207736 ~ 27210602 (+) True LOC122342370
XM_043236327.1 mRNA downstream 1074767 27356812 ~ 27358163 (+) True LOC122342494
unassigned_transcript_702 other upstream 10072 26271831 ~ 26271902 (+) True trnae-cuc_22
unassigned_transcript_699 other upstream 11282 26270621 ~ 26270692 (+) True trnae-cuc_21
unassigned_transcript_695 other upstream 12701 26269202 ~ 26269273 (+) True trnae-cuc_20
unassigned_transcript_692 other upstream 14089 26267814 ~ 26267885 (+) True trnae-cuc_19
unassigned_transcript_690 other upstream 15979 26265924 ~ 26265995 (+) True trnae-cuc_18
unassigned_transcript_719 other downstream 11104 26293149 ~ 26293220 (+) True trnae-cuc_24
unassigned_transcript_723 other downstream 15441 26297486 ~ 26297557 (+) True trnae-cuc_25
unassigned_transcript_726 other downstream 16929 26298974 ~ 26299045 (+) True trnae-cuc_26
unassigned_transcript_733 other downstream 205394 26487439 ~ 26487520 (+) True trnas-uga_67
unassigned_transcript_734 other downstream 207133 26489178 ~ 26489250 (+) True trnak-uuu_69