RNA id: unassigned_transcript_712



Basic Information


Item Value
RNA id unassigned_transcript_712
length 73
RNA type tRNA
GC content 0.58
exon number 2
gene id trnay-gua_17
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26284070 ~ 26284156 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CCTTcgatagctcagttggtagagcggaGGACTGTAGATCCTTAGGTCGCTGGTCCGACTCCGGCTCGAAGGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46357 lncRNA downstream 45832 26237920 ~ 26238238 (-) True G31399
XR_006250568.1 lncRNA downstream 262686 26020548 ~ 26021384 (-) True LOC122342449
XR_006250768.1 lncRNA downstream 364660 25918811 ~ 25919410 (-) True LOC122343400
TU46348 lncRNA downstream 368113 25915697 ~ 25915957 (-) True G31390
TU46342 lncRNA downstream 468845 25813904 ~ 25815225 (-) True G31387
XR_006250605.1 lncRNA upstream 19506 26303662 ~ 26304672 (-) True LOC122342589
TU46360 lncRNA upstream 143996 26428152 ~ 26433786 (-) True G31402
TU46371 lncRNA upstream 194560 26478716 ~ 26478933 (-) True G31413
XR_006250546.1 lncRNA upstream 404457 26688613 ~ 26689452 (-) True LOC122342214
XR_006250601.1 lncRNA upstream 447504 26731660 ~ 26732626 (-) True LOC122342580
XM_043236140.1 mRNA downstream 257963 26023937 ~ 26026107 (-) True LOC122342359
XM_043236138.1 mRNA downstream 260826 26022144 ~ 26023244 (-) True LOC122342358
XM_043236136.1 mRNA downstream 328449 25952760 ~ 25955621 (-) True LOC122342356
XM_043237668.1 mRNA downstream 505549 25762532 ~ 25778521 (-) True hm13
XM_043236143.1 mRNA upstream 405828 26689984 ~ 26691677 (-) True LOC122342363
XM_043236144.1 mRNA upstream 408465 26692621 ~ 26693546 (-) True LOC122342364
XM_043236146.1 mRNA upstream 581617 26865773 ~ 26869148 (-) True LOC122342367
XM_043236245.1 mRNA upstream 1099597 27383753 ~ 27389398 (-) True LOC122342454
XM_043238050.1 mRNA upstream 1124932 27409088 ~ 27415650 (-) True flot1a
unassigned_transcript_711 other downstream 1135 26282865 ~ 26282935 (-) True trnae-uuc_15
unassigned_transcript_709 other downstream 2193 26281805 ~ 26281877 (-) True trnar-acg_18
unassigned_transcript_708 other downstream 2547 26281452 ~ 26281523 (-) True trnae-uuc_14
unassigned_transcript_707 other downstream 6589 26277407 ~ 26277481 (-) True trnar-acg_17
unassigned_transcript_706 other downstream 6940 26277059 ~ 26277130 (-) True trnae-uuc_13
unassigned_transcript_713 other upstream 1076 26285232 ~ 26285318 (-) True trnay-gua_18
unassigned_transcript_714 other upstream 1288 26285444 ~ 26285515 (-) True trnae-uuc_16
unassigned_transcript_715 other upstream 1641 26285797 ~ 26285869 (-) True trnar-acg_19
unassigned_transcript_716 other upstream 5415 26289571 ~ 26289657 (-) True trnay-gua_19
unassigned_transcript_717 other upstream 5627 26289783 ~ 26289854 (-) True trnae-uuc_17