RNA id: unassigned_transcript_717



Basic Information


Item Value
RNA id unassigned_transcript_717
length 72
RNA type tRNA
GC content 0.58
exon number 1
gene id trnae-uuc_17
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26289783 ~ 26289854 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCCCATATGGTCTAGCGGTGAGGattcctggttttcacccaggCGGCCTGGGTTCGACTCCCGGTAtgggaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46357 lncRNA downstream 51545 26237920 ~ 26238238 (-) True G31399
XR_006250568.1 lncRNA downstream 268399 26020548 ~ 26021384 (-) True LOC122342449
XR_006250768.1 lncRNA downstream 370373 25918811 ~ 25919410 (-) True LOC122343400
TU46348 lncRNA downstream 373826 25915697 ~ 25915957 (-) True G31390
TU46342 lncRNA downstream 474558 25813904 ~ 25815225 (-) True G31387
XR_006250605.1 lncRNA upstream 13808 26303662 ~ 26304672 (-) True LOC122342589
TU46360 lncRNA upstream 138298 26428152 ~ 26433786 (-) True G31402
TU46371 lncRNA upstream 188862 26478716 ~ 26478933 (-) True G31413
XR_006250546.1 lncRNA upstream 398759 26688613 ~ 26689452 (-) True LOC122342214
XR_006250601.1 lncRNA upstream 441806 26731660 ~ 26732626 (-) True LOC122342580
XM_043236140.1 mRNA downstream 263676 26023937 ~ 26026107 (-) True LOC122342359
XM_043236138.1 mRNA downstream 266539 26022144 ~ 26023244 (-) True LOC122342358
XM_043236136.1 mRNA downstream 334162 25952760 ~ 25955621 (-) True LOC122342356
XM_043237668.1 mRNA downstream 511262 25762532 ~ 25778521 (-) True hm13
XM_043236143.1 mRNA upstream 400130 26689984 ~ 26691677 (-) True LOC122342363
XM_043236144.1 mRNA upstream 402767 26692621 ~ 26693546 (-) True LOC122342364
XM_043236146.1 mRNA upstream 575919 26865773 ~ 26869148 (-) True LOC122342367
XM_043236245.1 mRNA upstream 1093899 27383753 ~ 27389398 (-) True LOC122342454
XM_043238050.1 mRNA upstream 1119234 27409088 ~ 27415650 (-) True flot1a
unassigned_transcript_716 other downstream 126 26289571 ~ 26289657 (-) True trnay-gua_19
unassigned_transcript_715 other downstream 3914 26285797 ~ 26285869 (-) True trnar-acg_19
unassigned_transcript_714 other downstream 4268 26285444 ~ 26285515 (-) True trnae-uuc_16
unassigned_transcript_713 other downstream 4465 26285232 ~ 26285318 (-) True trnay-gua_18
unassigned_transcript_712 other downstream 5627 26284070 ~ 26284156 (-) True trnay-gua_17
unassigned_transcript_718 other upstream 282 26290136 ~ 26290208 (-) True trnar-acg_20
unassigned_transcript_720 other upstream 4063 26293917 ~ 26294003 (-) True trnay-gua_20
unassigned_transcript_721 other upstream 4269 26294123 ~ 26294194 (-) True trnae-uuc_18
unassigned_transcript_722 other upstream 4620 26294474 ~ 26294546 (-) True trnar-acg_21
unassigned_transcript_724 other upstream 8390 26298244 ~ 26298330 (-) True trnay-gua_21