RNA id: unassigned_transcript_735


Basic Information

Item Value
RNA id unassigned_transcript_735
length 82
RNA type tRNA
GC content 0.57
exon number 1
gene id trnas-uga_68
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26490329 ~ 26490410 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gtagtcgtggccgagaggttaaggcgatggacttgaaatccattggtgtctccccgcgcaggttcgaaccctgccgactatg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU46370 lncRNA upstream 11396 26478716 ~ 26478933 (+) True G31412
TU46362 lncRNA upstream 46338 26443506 ~ 26443991 (+) True G31404
TU46361 lncRNA upstream 53730 26436348 ~ 26436599 (+) True G31403
XR_006250570.1 lncRNA upstream 326932 26161491 ~ 26163397 (+) True LOC122342452
XR_006250606.1 lncRNA upstream 573130 25916389 ~ 25917199 (+) True LOC122342592
XR_006250760.1 lncRNA downstream 278521 26768931 ~ 26769820 (+) True LOC122343359
TU46380 lncRNA downstream 288883 26779293 ~ 26779606 (+) True G31420
TU46382 lncRNA downstream 377782 26868192 ~ 26868471 (+) True G31422
TU46384 lncRNA downstream 411302 26901712 ~ 26902005 (+) True G31424
XR_006250602.1 lncRNA downstream 442930 26933340 ~ 26934351 (+) True LOC122342584
XM_043236142.1 mRNA upstream 63090 26382916 ~ 26427239 (+) True LOC122342362
XM_043236141.1 mRNA upstream 312711 26173194 ~ 26177618 (+) True LOC122342360
XM_043236137.1 mRNA upstream 512706 25974877 ~ 25977623 (+) True LOC122342357
XM_043236264.1 mRNA upstream 761678 25711662 ~ 25728651 (+) True col9a3
XM_043237792.1 mRNA upstream 780692 25703962 ~ 25709637 (+) False ogfr
XM_043236145.1 mRNA downstream 274543 26764953 ~ 26767173 (+) True LOC122342366
XM_043236148.1 mRNA downstream 514291 27004701 ~ 27006306 (+) True LOC122342369
XM_043236149.1 mRNA downstream 717326 27207736 ~ 27210602 (+) True LOC122342370
XM_043236327.1 mRNA downstream 866402 27356812 ~ 27358163 (+) True LOC122342494
XM_043236150.1 mRNA downstream 873608 27364018 ~ 27371196 (+) True LOC122342372
unassigned_transcript_734 other upstream 1079 26489178 ~ 26489250 (+) True trnak-uuu_69
unassigned_transcript_733 other upstream 2809 26487439 ~ 26487520 (+) True trnas-uga_67
unassigned_transcript_726 other upstream 191284 26298974 ~ 26299045 (+) True trnae-cuc_26
unassigned_transcript_723 other upstream 192772 26297486 ~ 26297557 (+) True trnae-cuc_25
unassigned_transcript_719 other upstream 197109 26293149 ~ 26293220 (+) True trnae-cuc_24
unassigned_transcript_736 other downstream 1229 26491639 ~ 26491711 (+) True trnak-uuu_70
unassigned_transcript_737 other downstream 2038 26492448 ~ 26492529 (+) True trnas-aga_70
unassigned_transcript_738 other downstream 3427 26493837 ~ 26493917 (+) True trnas-aga_71
unassigned_transcript_739 other downstream 3773 26494183 ~ 26494264 (+) True trnas-uga_69
unassigned_transcript_740 other downstream 6079 26496489 ~ 26496570 (+) True trnas-aga_72

Expression Profile