RNA id: unassigned_transcript_740


Basic Information

Item Value
RNA id unassigned_transcript_740
length 82
RNA type tRNA
GC content 0.59
exon number 1
gene id trnas-aga_72
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26496489 ~ 26496570 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gtagtcgtgggcgagtggttaaggcgatggactagaaatccattggggtctcccggcgcaggttcgaatcctgccgactacg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU46370 lncRNA upstream 17556 26478716 ~ 26478933 (+) True G31412
TU46362 lncRNA upstream 52498 26443506 ~ 26443991 (+) True G31404
TU46361 lncRNA upstream 59890 26436348 ~ 26436599 (+) True G31403
XR_006250570.1 lncRNA upstream 333092 26161491 ~ 26163397 (+) True LOC122342452
XR_006250606.1 lncRNA upstream 579290 25916389 ~ 25917199 (+) True LOC122342592
XR_006250760.1 lncRNA downstream 272361 26768931 ~ 26769820 (+) True LOC122343359
TU46380 lncRNA downstream 282723 26779293 ~ 26779606 (+) True G31420
TU46382 lncRNA downstream 371622 26868192 ~ 26868471 (+) True G31422
TU46384 lncRNA downstream 405142 26901712 ~ 26902005 (+) True G31424
XR_006250602.1 lncRNA downstream 436770 26933340 ~ 26934351 (+) True LOC122342584
XM_043236142.1 mRNA upstream 69250 26382916 ~ 26427239 (+) True LOC122342362
XM_043236141.1 mRNA upstream 318871 26173194 ~ 26177618 (+) True LOC122342360
XM_043236137.1 mRNA upstream 518866 25974877 ~ 25977623 (+) True LOC122342357
XM_043236264.1 mRNA upstream 767838 25711662 ~ 25728651 (+) True col9a3
XM_043237792.1 mRNA upstream 786852 25703962 ~ 25709637 (+) False ogfr
XM_043236145.1 mRNA downstream 268383 26764953 ~ 26767173 (+) True LOC122342366
XM_043236148.1 mRNA downstream 508131 27004701 ~ 27006306 (+) True LOC122342369
XM_043236149.1 mRNA downstream 711166 27207736 ~ 27210602 (+) True LOC122342370
XM_043236327.1 mRNA downstream 860242 27356812 ~ 27358163 (+) True LOC122342494
XM_043236150.1 mRNA downstream 867448 27364018 ~ 27371196 (+) True LOC122342372
unassigned_transcript_739 other upstream 2225 26494183 ~ 26494264 (+) True trnas-uga_69
unassigned_transcript_738 other upstream 2572 26493837 ~ 26493917 (+) True trnas-aga_71
unassigned_transcript_737 other upstream 3960 26492448 ~ 26492529 (+) True trnas-aga_70
unassigned_transcript_736 other upstream 4778 26491639 ~ 26491711 (+) True trnak-uuu_70
unassigned_transcript_735 other upstream 6079 26490329 ~ 26490410 (+) True trnas-uga_68
unassigned_transcript_741 other downstream 265 26496835 ~ 26496915 (+) True trnas-uga_70
unassigned_transcript_743 other downstream 1766 26498336 ~ 26498408 (+) True trnak-uuu_71
unassigned_transcript_744 other downstream 2576 26499146 ~ 26499228 (+) True trnas-aga_73
unassigned_transcript_745 other downstream 2926 26499496 ~ 26499576 (+) True trnas-uga_71
unassigned_transcript_746 other downstream 4123 26500693 ~ 26500764 (+) True trnah-gug_15