RNA id: unassigned_transcript_748


Basic Information

Item Value
RNA id unassigned_transcript_748
length 82
RNA type tRNA
GC content 0.59
exon number 1
gene id trnas-aga_74
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26502532 ~ 26502613 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gtagtcgtggccgagtggttaaggcgatggactagaaatccattggggtctccccgcgcaggttcgaatcctgccgactacg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU46370 lncRNA upstream 23599 26478716 ~ 26478933 (+) True G31412
TU46362 lncRNA upstream 58541 26443506 ~ 26443991 (+) True G31404
TU46361 lncRNA upstream 65933 26436348 ~ 26436599 (+) True G31403
XR_006250570.1 lncRNA upstream 339135 26161491 ~ 26163397 (+) True LOC122342452
XR_006250606.1 lncRNA upstream 585333 25916389 ~ 25917199 (+) True LOC122342592
XR_006250760.1 lncRNA downstream 266318 26768931 ~ 26769820 (+) True LOC122343359
TU46380 lncRNA downstream 276680 26779293 ~ 26779606 (+) True G31420
TU46382 lncRNA downstream 365579 26868192 ~ 26868471 (+) True G31422
TU46384 lncRNA downstream 399099 26901712 ~ 26902005 (+) True G31424
XR_006250602.1 lncRNA downstream 430727 26933340 ~ 26934351 (+) True LOC122342584
XM_043236142.1 mRNA upstream 75293 26382916 ~ 26427239 (+) True LOC122342362
XM_043236141.1 mRNA upstream 324914 26173194 ~ 26177618 (+) True LOC122342360
XM_043236137.1 mRNA upstream 524909 25974877 ~ 25977623 (+) True LOC122342357
XM_043236264.1 mRNA upstream 773881 25711662 ~ 25728651 (+) True col9a3
XM_043237792.1 mRNA upstream 792895 25703962 ~ 25709637 (+) False ogfr
XM_043236145.1 mRNA downstream 262340 26764953 ~ 26767173 (+) True LOC122342366
XM_043236148.1 mRNA downstream 502088 27004701 ~ 27006306 (+) True LOC122342369
XM_043236149.1 mRNA downstream 705123 27207736 ~ 27210602 (+) True LOC122342370
XM_043236327.1 mRNA downstream 854199 27356812 ~ 27358163 (+) True LOC122342494
XM_043236150.1 mRNA downstream 861405 27364018 ~ 27371196 (+) True LOC122342372
unassigned_transcript_747 other upstream 1453 26501007 ~ 26501079 (+) True trnak-uuu_72
unassigned_transcript_746 other upstream 1768 26500693 ~ 26500764 (+) True trnah-gug_15
unassigned_transcript_745 other upstream 2956 26499496 ~ 26499576 (+) True trnas-uga_71
unassigned_transcript_744 other upstream 3304 26499146 ~ 26499228 (+) True trnas-aga_73
unassigned_transcript_743 other upstream 4124 26498336 ~ 26498408 (+) True trnak-uuu_71
unassigned_transcript_749 other downstream 266 26502879 ~ 26502960 (+) True trnas-uga_72
unassigned_transcript_751 other downstream 1778 26504391 ~ 26504463 (+) True trnak-uuu_73
unassigned_transcript_752 other downstream 2497 26505110 ~ 26505182 (+) True trnak-uuu_74
unassigned_transcript_753 other downstream 3305 26505918 ~ 26505999 (+) True trnas-aga_75
unassigned_transcript_754 other downstream 3652 26506265 ~ 26506345 (+) True trnas-uga_73