RNA id: unassigned_transcript_751


Basic Information

Item Value
RNA id unassigned_transcript_751
length 73
RNA type tRNA
GC content 0.55
exon number 1
gene id trnak-uuu_73
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26504391 ~ 26504463 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gcctggatagctcagtcggtagagcatcagacttttaatctgagggtccagggttcaagtccctgttcgggcg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU46370 lncRNA upstream 25458 26478716 ~ 26478933 (+) True G31412
TU46362 lncRNA upstream 60400 26443506 ~ 26443991 (+) True G31404
TU46361 lncRNA upstream 67792 26436348 ~ 26436599 (+) True G31403
XR_006250570.1 lncRNA upstream 340994 26161491 ~ 26163397 (+) True LOC122342452
XR_006250606.1 lncRNA upstream 587192 25916389 ~ 25917199 (+) True LOC122342592
XR_006250760.1 lncRNA downstream 264468 26768931 ~ 26769820 (+) True LOC122343359
TU46380 lncRNA downstream 274830 26779293 ~ 26779606 (+) True G31420
TU46382 lncRNA downstream 363729 26868192 ~ 26868471 (+) True G31422
TU46384 lncRNA downstream 397249 26901712 ~ 26902005 (+) True G31424
XR_006250602.1 lncRNA downstream 428877 26933340 ~ 26934351 (+) True LOC122342584
XM_043236142.1 mRNA upstream 77152 26382916 ~ 26427239 (+) True LOC122342362
XM_043236141.1 mRNA upstream 326773 26173194 ~ 26177618 (+) True LOC122342360
XM_043236137.1 mRNA upstream 526768 25974877 ~ 25977623 (+) True LOC122342357
XM_043236264.1 mRNA upstream 775740 25711662 ~ 25728651 (+) True col9a3
XM_043237792.1 mRNA upstream 794754 25703962 ~ 25709637 (+) False ogfr
XM_043236145.1 mRNA downstream 260490 26764953 ~ 26767173 (+) True LOC122342366
XM_043236148.1 mRNA downstream 500238 27004701 ~ 27006306 (+) True LOC122342369
XM_043236149.1 mRNA downstream 703273 27207736 ~ 27210602 (+) True LOC122342370
XM_043236327.1 mRNA downstream 852349 27356812 ~ 27358163 (+) True LOC122342494
XM_043236150.1 mRNA downstream 859555 27364018 ~ 27371196 (+) True LOC122342372
unassigned_transcript_749 other upstream 1431 26502879 ~ 26502960 (+) True trnas-uga_72
unassigned_transcript_748 other upstream 1778 26502532 ~ 26502613 (+) True trnas-aga_74
unassigned_transcript_747 other upstream 3312 26501007 ~ 26501079 (+) True trnak-uuu_72
unassigned_transcript_746 other upstream 3627 26500693 ~ 26500764 (+) True trnah-gug_15
unassigned_transcript_745 other upstream 4815 26499496 ~ 26499576 (+) True trnas-uga_71
unassigned_transcript_752 other downstream 647 26505110 ~ 26505182 (+) True trnak-uuu_74
unassigned_transcript_753 other downstream 1455 26505918 ~ 26505999 (+) True trnas-aga_75
unassigned_transcript_754 other downstream 1802 26506265 ~ 26506345 (+) True trnas-uga_73
unassigned_transcript_755 other downstream 3707 26508170 ~ 26508242 (+) True trnak-uuu_75
unassigned_transcript_756 other downstream 4519 26508982 ~ 26509063 (+) True trnas-aga_76