RNA id: unassigned_transcript_752



Basic Information


Item Value
RNA id unassigned_transcript_752
length 73
RNA type tRNA
GC content 0.55
exon number 1
gene id trnak-uuu_74
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26505110 ~ 26505182 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gcctggatagctcagtcggtagagcatcagacttttaatctgagggtccagggttcaagtccctgttcgggcg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46370 lncRNA upstream 26177 26478716 ~ 26478933 (+) True G31412
TU46362 lncRNA upstream 61119 26443506 ~ 26443991 (+) True G31404
TU46361 lncRNA upstream 68511 26436348 ~ 26436599 (+) True G31403
XR_006250570.1 lncRNA upstream 341713 26161491 ~ 26163397 (+) True LOC122342452
XR_006250606.1 lncRNA upstream 587911 25916389 ~ 25917199 (+) True LOC122342592
XR_006250760.1 lncRNA downstream 263749 26768931 ~ 26769820 (+) True LOC122343359
TU46380 lncRNA downstream 274111 26779293 ~ 26779606 (+) True G31420
TU46382 lncRNA downstream 363010 26868192 ~ 26868471 (+) True G31422
TU46384 lncRNA downstream 396530 26901712 ~ 26902005 (+) True G31424
XR_006250602.1 lncRNA downstream 428158 26933340 ~ 26934351 (+) True LOC122342584
XM_043236142.1 mRNA upstream 77871 26382916 ~ 26427239 (+) True LOC122342362
XM_043236141.1 mRNA upstream 327492 26173194 ~ 26177618 (+) True LOC122342360
XM_043236137.1 mRNA upstream 527487 25974877 ~ 25977623 (+) True LOC122342357
XM_043236264.1 mRNA upstream 776459 25711662 ~ 25728651 (+) True col9a3
XM_043237792.1 mRNA upstream 795473 25703962 ~ 25709637 (+) False ogfr
XM_043236145.1 mRNA downstream 259771 26764953 ~ 26767173 (+) True LOC122342366
XM_043236148.1 mRNA downstream 499519 27004701 ~ 27006306 (+) True LOC122342369
XM_043236149.1 mRNA downstream 702554 27207736 ~ 27210602 (+) True LOC122342370
XM_043236327.1 mRNA downstream 851630 27356812 ~ 27358163 (+) True LOC122342494
XM_043236150.1 mRNA downstream 858836 27364018 ~ 27371196 (+) True LOC122342372
unassigned_transcript_751 other upstream 647 26504391 ~ 26504463 (+) True trnak-uuu_73
unassigned_transcript_749 other upstream 2150 26502879 ~ 26502960 (+) True trnas-uga_72
unassigned_transcript_748 other upstream 2497 26502532 ~ 26502613 (+) True trnas-aga_74
unassigned_transcript_747 other upstream 4031 26501007 ~ 26501079 (+) True trnak-uuu_72
unassigned_transcript_746 other upstream 4346 26500693 ~ 26500764 (+) True trnah-gug_15
unassigned_transcript_753 other downstream 736 26505918 ~ 26505999 (+) True trnas-aga_75
unassigned_transcript_754 other downstream 1083 26506265 ~ 26506345 (+) True trnas-uga_73
unassigned_transcript_755 other downstream 2988 26508170 ~ 26508242 (+) True trnak-uuu_75
unassigned_transcript_756 other downstream 3800 26508982 ~ 26509063 (+) True trnas-aga_76
unassigned_transcript_757 other downstream 4146 26509328 ~ 26509408 (+) True trnas-uga_74