RNA id: unassigned_transcript_753


Basic Information

Item Value
RNA id unassigned_transcript_753
length 82
RNA type tRNA
GC content 0.59
exon number 1
gene id trnas-aga_75
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26505918 ~ 26505999 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gtagtcgtggccgagtggttaaggcgatggactagaaatccattggggtctccccgcgcaggttcgaatcctgccgactacg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU46370 lncRNA upstream 26985 26478716 ~ 26478933 (+) True G31412
TU46362 lncRNA upstream 61927 26443506 ~ 26443991 (+) True G31404
TU46361 lncRNA upstream 69319 26436348 ~ 26436599 (+) True G31403
XR_006250570.1 lncRNA upstream 342521 26161491 ~ 26163397 (+) True LOC122342452
XR_006250606.1 lncRNA upstream 588719 25916389 ~ 25917199 (+) True LOC122342592
XR_006250760.1 lncRNA downstream 262932 26768931 ~ 26769820 (+) True LOC122343359
TU46380 lncRNA downstream 273294 26779293 ~ 26779606 (+) True G31420
TU46382 lncRNA downstream 362193 26868192 ~ 26868471 (+) True G31422
TU46384 lncRNA downstream 395713 26901712 ~ 26902005 (+) True G31424
XR_006250602.1 lncRNA downstream 427341 26933340 ~ 26934351 (+) True LOC122342584
XM_043236142.1 mRNA upstream 78679 26382916 ~ 26427239 (+) True LOC122342362
XM_043236141.1 mRNA upstream 328300 26173194 ~ 26177618 (+) True LOC122342360
XM_043236137.1 mRNA upstream 528295 25974877 ~ 25977623 (+) True LOC122342357
XM_043236264.1 mRNA upstream 777267 25711662 ~ 25728651 (+) True col9a3
XM_043237792.1 mRNA upstream 796281 25703962 ~ 25709637 (+) False ogfr
XM_043236145.1 mRNA downstream 258954 26764953 ~ 26767173 (+) True LOC122342366
XM_043236148.1 mRNA downstream 498702 27004701 ~ 27006306 (+) True LOC122342369
XM_043236149.1 mRNA downstream 701737 27207736 ~ 27210602 (+) True LOC122342370
XM_043236327.1 mRNA downstream 850813 27356812 ~ 27358163 (+) True LOC122342494
XM_043236150.1 mRNA downstream 858019 27364018 ~ 27371196 (+) True LOC122342372
unassigned_transcript_752 other upstream 736 26505110 ~ 26505182 (+) True trnak-uuu_74
unassigned_transcript_751 other upstream 1455 26504391 ~ 26504463 (+) True trnak-uuu_73
unassigned_transcript_749 other upstream 2958 26502879 ~ 26502960 (+) True trnas-uga_72
unassigned_transcript_748 other upstream 3305 26502532 ~ 26502613 (+) True trnas-aga_74
unassigned_transcript_747 other upstream 4839 26501007 ~ 26501079 (+) True trnak-uuu_72
unassigned_transcript_754 other downstream 266 26506265 ~ 26506345 (+) True trnas-uga_73
unassigned_transcript_755 other downstream 2171 26508170 ~ 26508242 (+) True trnak-uuu_75
unassigned_transcript_756 other downstream 2983 26508982 ~ 26509063 (+) True trnas-aga_76
unassigned_transcript_757 other downstream 3329 26509328 ~ 26509408 (+) True trnas-uga_74
unassigned_transcript_758 other downstream 4839 26510838 ~ 26510910 (+) True trnak-uuu_76