RNA id: unassigned_transcript_758


Basic Information

Item Value
RNA id unassigned_transcript_758
length 73
RNA type tRNA
GC content 0.55
exon number 1
gene id trnak-uuu_76
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26510838 ~ 26510910 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gcctggatagctcagtcggtagagcatcagacttttaatctgagggtccagggttcaagtccctgttcgggcg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU46370 lncRNA upstream 31905 26478716 ~ 26478933 (+) True G31412
TU46362 lncRNA upstream 66847 26443506 ~ 26443991 (+) True G31404
TU46361 lncRNA upstream 74239 26436348 ~ 26436599 (+) True G31403
XR_006250570.1 lncRNA upstream 347441 26161491 ~ 26163397 (+) True LOC122342452
XR_006250606.1 lncRNA upstream 593639 25916389 ~ 25917199 (+) True LOC122342592
XR_006250760.1 lncRNA downstream 258021 26768931 ~ 26769820 (+) True LOC122343359
TU46380 lncRNA downstream 268383 26779293 ~ 26779606 (+) True G31420
TU46382 lncRNA downstream 357282 26868192 ~ 26868471 (+) True G31422
TU46384 lncRNA downstream 390802 26901712 ~ 26902005 (+) True G31424
XR_006250602.1 lncRNA downstream 422430 26933340 ~ 26934351 (+) True LOC122342584
XM_043236142.1 mRNA upstream 83599 26382916 ~ 26427239 (+) True LOC122342362
XM_043236141.1 mRNA upstream 333220 26173194 ~ 26177618 (+) True LOC122342360
XM_043236137.1 mRNA upstream 533215 25974877 ~ 25977623 (+) True LOC122342357
XM_043236264.1 mRNA upstream 782187 25711662 ~ 25728651 (+) True col9a3
XM_043237792.1 mRNA upstream 801201 25703962 ~ 25709637 (+) False ogfr
XM_043236145.1 mRNA downstream 254043 26764953 ~ 26767173 (+) True LOC122342366
XM_043236148.1 mRNA downstream 493791 27004701 ~ 27006306 (+) True LOC122342369
XM_043236149.1 mRNA downstream 696826 27207736 ~ 27210602 (+) True LOC122342370
XM_043236327.1 mRNA downstream 845902 27356812 ~ 27358163 (+) True LOC122342494
XM_043236150.1 mRNA downstream 853108 27364018 ~ 27371196 (+) True LOC122342372
unassigned_transcript_757 other upstream 1430 26509328 ~ 26509408 (+) True trnas-uga_74
unassigned_transcript_756 other upstream 1775 26508982 ~ 26509063 (+) True trnas-aga_76
unassigned_transcript_755 other upstream 2596 26508170 ~ 26508242 (+) True trnak-uuu_75
unassigned_transcript_754 other upstream 4493 26506265 ~ 26506345 (+) True trnas-uga_73
unassigned_transcript_753 other upstream 4839 26505918 ~ 26505999 (+) True trnas-aga_75
unassigned_transcript_759 other downstream 644 26511554 ~ 26511626 (+) True trnak-uuu_77
unassigned_transcript_760 other downstream 1451 26512361 ~ 26512442 (+) True trnas-aga_77
unassigned_transcript_761 other downstream 1796 26512706 ~ 26512787 (+) True trnas-uga_75
unassigned_transcript_762 other downstream 3517 26514427 ~ 26514499 (+) True trnak-uuu_78
unassigned_transcript_763 other downstream 4321 26515231 ~ 26515312 (+) True trnas-aga_78