RNA id: unassigned_transcript_767



Basic Information


Item Value
RNA id unassigned_transcript_767
length 81
RNA type tRNA
GC content 0.59
exon number 1
gene id trnas-uga_77
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26518343 ~ 26518423 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gtagtcgtggccgagaggttaaggcgatggacttgaaatccattggggtctcccgcgcaggttcgaaccctgccgactacg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46370 lncRNA upstream 39410 26478716 ~ 26478933 (+) True G31412
TU46362 lncRNA upstream 74352 26443506 ~ 26443991 (+) True G31404
TU46361 lncRNA upstream 81744 26436348 ~ 26436599 (+) True G31403
XR_006250570.1 lncRNA upstream 354946 26161491 ~ 26163397 (+) True LOC122342452
XR_006250606.1 lncRNA upstream 601144 25916389 ~ 25917199 (+) True LOC122342592
XR_006250760.1 lncRNA downstream 250508 26768931 ~ 26769820 (+) True LOC122343359
TU46380 lncRNA downstream 260870 26779293 ~ 26779606 (+) True G31420
TU46382 lncRNA downstream 349769 26868192 ~ 26868471 (+) True G31422
TU46384 lncRNA downstream 383289 26901712 ~ 26902005 (+) True G31424
XR_006250602.1 lncRNA downstream 414917 26933340 ~ 26934351 (+) True LOC122342584
XM_043236142.1 mRNA upstream 91104 26382916 ~ 26427239 (+) True LOC122342362
XM_043236141.1 mRNA upstream 340725 26173194 ~ 26177618 (+) True LOC122342360
XM_043236137.1 mRNA upstream 540720 25974877 ~ 25977623 (+) True LOC122342357
XM_043236264.1 mRNA upstream 789692 25711662 ~ 25728651 (+) True col9a3
XM_043237792.1 mRNA upstream 808706 25703962 ~ 25709637 (+) False ogfr
XM_043236145.1 mRNA downstream 246530 26764953 ~ 26767173 (+) True LOC122342366
XM_043236148.1 mRNA downstream 486278 27004701 ~ 27006306 (+) True LOC122342369
XM_043236149.1 mRNA downstream 689313 27207736 ~ 27210602 (+) True LOC122342370
XM_043236327.1 mRNA downstream 838389 27356812 ~ 27358163 (+) True LOC122342494
XM_043236150.1 mRNA downstream 845595 27364018 ~ 27371196 (+) True LOC122342372
unassigned_transcript_766 other upstream 267 26517997 ~ 26518076 (+) True trnas-aga_79
unassigned_transcript_765 other upstream 1083 26517188 ~ 26517260 (+) True trnak-uuu_79
unassigned_transcript_764 other upstream 2686 26515577 ~ 26515657 (+) True trnas-uga_76
unassigned_transcript_763 other upstream 3031 26515231 ~ 26515312 (+) True trnas-aga_78
unassigned_transcript_762 other upstream 3844 26514427 ~ 26514499 (+) True trnak-uuu_78
unassigned_transcript_769 other downstream 2577 26521000 ~ 26521081 (+) True trnas-aga_80
unassigned_transcript_770 other downstream 2924 26521347 ~ 26521428 (+) True trnas-uga_78
unassigned_transcript_771 other downstream 5421 26523844 ~ 26523923 (+) True trnas-aga_81
unassigned_transcript_772 other downstream 5766 26524189 ~ 26524269 (+) True trnas-uga_79
unassigned_transcript_773 other downstream 8018 26526441 ~ 26526522 (+) True trnas-aga_82