RNA id: unassigned_transcript_770


Basic Information

Item Value
RNA id unassigned_transcript_770
length 82
RNA type tRNA
GC content 0.60
exon number 1
gene id trnas-uga_78
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26521347 ~ 26521428 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gtagtcgtggccgagaggttaaggcgatggacttgaaatccattggggtctccccgcgcaggttcgaaccctgccgactacg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU46370 lncRNA upstream 42414 26478716 ~ 26478933 (+) True G31412
TU46362 lncRNA upstream 77356 26443506 ~ 26443991 (+) True G31404
TU46361 lncRNA upstream 84748 26436348 ~ 26436599 (+) True G31403
XR_006250570.1 lncRNA upstream 357950 26161491 ~ 26163397 (+) True LOC122342452
XR_006250606.1 lncRNA upstream 604148 25916389 ~ 25917199 (+) True LOC122342592
XR_006250760.1 lncRNA downstream 247503 26768931 ~ 26769820 (+) True LOC122343359
TU46380 lncRNA downstream 257865 26779293 ~ 26779606 (+) True G31420
TU46382 lncRNA downstream 346764 26868192 ~ 26868471 (+) True G31422
TU46384 lncRNA downstream 380284 26901712 ~ 26902005 (+) True G31424
XR_006250602.1 lncRNA downstream 411912 26933340 ~ 26934351 (+) True LOC122342584
XM_043236142.1 mRNA upstream 94108 26382916 ~ 26427239 (+) True LOC122342362
XM_043236141.1 mRNA upstream 343729 26173194 ~ 26177618 (+) True LOC122342360
XM_043236137.1 mRNA upstream 543724 25974877 ~ 25977623 (+) True LOC122342357
XM_043236264.1 mRNA upstream 792696 25711662 ~ 25728651 (+) True col9a3
XM_043237792.1 mRNA upstream 811710 25703962 ~ 25709637 (+) False ogfr
XM_043236145.1 mRNA downstream 243525 26764953 ~ 26767173 (+) True LOC122342366
XM_043236148.1 mRNA downstream 483273 27004701 ~ 27006306 (+) True LOC122342369
XM_043236149.1 mRNA downstream 686308 27207736 ~ 27210602 (+) True LOC122342370
XM_043236327.1 mRNA downstream 835384 27356812 ~ 27358163 (+) True LOC122342494
XM_043236150.1 mRNA downstream 842590 27364018 ~ 27371196 (+) True LOC122342372
unassigned_transcript_769 other upstream 266 26521000 ~ 26521081 (+) True trnas-aga_80
unassigned_transcript_767 other upstream 2924 26518343 ~ 26518423 (+) True trnas-uga_77
unassigned_transcript_766 other upstream 3271 26517997 ~ 26518076 (+) True trnas-aga_79
unassigned_transcript_765 other upstream 4087 26517188 ~ 26517260 (+) True trnak-uuu_79
unassigned_transcript_764 other upstream 5690 26515577 ~ 26515657 (+) True trnas-uga_76
unassigned_transcript_771 other downstream 2416 26523844 ~ 26523923 (+) True trnas-aga_81
unassigned_transcript_772 other downstream 2761 26524189 ~ 26524269 (+) True trnas-uga_79
unassigned_transcript_773 other downstream 5013 26526441 ~ 26526522 (+) True trnas-aga_82
unassigned_transcript_774 other downstream 5361 26526789 ~ 26526870 (+) True trnas-uga_80
unassigned_transcript_775 other downstream 6852 26528280 ~ 26528352 (+) True trnak-uuu_80