RNA id: unassigned_transcript_771


Basic Information

Item Value
RNA id unassigned_transcript_771
length 80
RNA type tRNA
GC content 0.58
exon number 1
gene id trnas-aga_81
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26523844 ~ 26523923 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gtagtcgtggcgagtggttaaggcgatggactagaaatccattggggtctcccgcgcaggttcgaatcctgccgactacg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU46370 lncRNA upstream 44911 26478716 ~ 26478933 (+) True G31412
TU46362 lncRNA upstream 79853 26443506 ~ 26443991 (+) True G31404
TU46361 lncRNA upstream 87245 26436348 ~ 26436599 (+) True G31403
XR_006250570.1 lncRNA upstream 360447 26161491 ~ 26163397 (+) True LOC122342452
XR_006250606.1 lncRNA upstream 606645 25916389 ~ 25917199 (+) True LOC122342592
XR_006250760.1 lncRNA downstream 245008 26768931 ~ 26769820 (+) True LOC122343359
TU46380 lncRNA downstream 255370 26779293 ~ 26779606 (+) True G31420
TU46382 lncRNA downstream 344269 26868192 ~ 26868471 (+) True G31422
TU46384 lncRNA downstream 377789 26901712 ~ 26902005 (+) True G31424
XR_006250602.1 lncRNA downstream 409417 26933340 ~ 26934351 (+) True LOC122342584
XM_043236142.1 mRNA upstream 96605 26382916 ~ 26427239 (+) True LOC122342362
XM_043236141.1 mRNA upstream 346226 26173194 ~ 26177618 (+) True LOC122342360
XM_043236137.1 mRNA upstream 546221 25974877 ~ 25977623 (+) True LOC122342357
XM_043236264.1 mRNA upstream 795193 25711662 ~ 25728651 (+) True col9a3
XM_043237792.1 mRNA upstream 814207 25703962 ~ 25709637 (+) False ogfr
XM_043236145.1 mRNA downstream 241030 26764953 ~ 26767173 (+) True LOC122342366
XM_043236148.1 mRNA downstream 480778 27004701 ~ 27006306 (+) True LOC122342369
XM_043236149.1 mRNA downstream 683813 27207736 ~ 27210602 (+) True LOC122342370
XM_043236327.1 mRNA downstream 832889 27356812 ~ 27358163 (+) True LOC122342494
XM_043236150.1 mRNA downstream 840095 27364018 ~ 27371196 (+) True LOC122342372
unassigned_transcript_770 other upstream 2416 26521347 ~ 26521428 (+) True trnas-uga_78
unassigned_transcript_769 other upstream 2763 26521000 ~ 26521081 (+) True trnas-aga_80
unassigned_transcript_767 other upstream 5421 26518343 ~ 26518423 (+) True trnas-uga_77
unassigned_transcript_766 other upstream 5768 26517997 ~ 26518076 (+) True trnas-aga_79
unassigned_transcript_765 other upstream 6584 26517188 ~ 26517260 (+) True trnak-uuu_79
unassigned_transcript_772 other downstream 266 26524189 ~ 26524269 (+) True trnas-uga_79
unassigned_transcript_773 other downstream 2518 26526441 ~ 26526522 (+) True trnas-aga_82
unassigned_transcript_774 other downstream 2866 26526789 ~ 26526870 (+) True trnas-uga_80
unassigned_transcript_775 other downstream 4357 26528280 ~ 26528352 (+) True trnak-uuu_80
unassigned_transcript_776 other downstream 5167 26529090 ~ 26529172 (+) True trnas-aga_83