RNA id: unassigned_transcript_775


Basic Information

Item Value
RNA id unassigned_transcript_775
length 73
RNA type tRNA
GC content 0.55
exon number 1
gene id trnak-uuu_80
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26528280 ~ 26528352 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gcctggatagctcagtcggtagagcatcagacttttaatctgagggtccagggttcaagtccctgttcgggcg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU46370 lncRNA upstream 49347 26478716 ~ 26478933 (+) True G31412
TU46362 lncRNA upstream 84289 26443506 ~ 26443991 (+) True G31404
TU46361 lncRNA upstream 91681 26436348 ~ 26436599 (+) True G31403
XR_006250570.1 lncRNA upstream 364883 26161491 ~ 26163397 (+) True LOC122342452
XR_006250606.1 lncRNA upstream 611081 25916389 ~ 25917199 (+) True LOC122342592
XR_006250760.1 lncRNA downstream 240579 26768931 ~ 26769820 (+) True LOC122343359
TU46380 lncRNA downstream 250941 26779293 ~ 26779606 (+) True G31420
TU46382 lncRNA downstream 339840 26868192 ~ 26868471 (+) True G31422
TU46384 lncRNA downstream 373360 26901712 ~ 26902005 (+) True G31424
XR_006250602.1 lncRNA downstream 404988 26933340 ~ 26934351 (+) True LOC122342584
XM_043236142.1 mRNA upstream 101041 26382916 ~ 26427239 (+) True LOC122342362
XM_043236141.1 mRNA upstream 350662 26173194 ~ 26177618 (+) True LOC122342360
XM_043236137.1 mRNA upstream 550657 25974877 ~ 25977623 (+) True LOC122342357
XM_043236264.1 mRNA upstream 799629 25711662 ~ 25728651 (+) True col9a3
XM_043237792.1 mRNA upstream 818643 25703962 ~ 25709637 (+) False ogfr
XM_043236145.1 mRNA downstream 236601 26764953 ~ 26767173 (+) True LOC122342366
XM_043236148.1 mRNA downstream 476349 27004701 ~ 27006306 (+) True LOC122342369
XM_043236149.1 mRNA downstream 679384 27207736 ~ 27210602 (+) True LOC122342370
XM_043236327.1 mRNA downstream 828460 27356812 ~ 27358163 (+) True LOC122342494
XM_043236150.1 mRNA downstream 835666 27364018 ~ 27371196 (+) True LOC122342372
unassigned_transcript_774 other upstream 1410 26526789 ~ 26526870 (+) True trnas-uga_80
unassigned_transcript_773 other upstream 1758 26526441 ~ 26526522 (+) True trnas-aga_82
unassigned_transcript_772 other upstream 4011 26524189 ~ 26524269 (+) True trnas-uga_79
unassigned_transcript_771 other upstream 4357 26523844 ~ 26523923 (+) True trnas-aga_81
unassigned_transcript_770 other upstream 6852 26521347 ~ 26521428 (+) True trnas-uga_78
unassigned_transcript_776 other downstream 738 26529090 ~ 26529172 (+) True trnas-aga_83
unassigned_transcript_777 other downstream 2124 26530476 ~ 26530557 (+) True trnas-aga_84
unassigned_transcript_778 other downstream 2471 26530823 ~ 26530904 (+) True trnas-uga_81
unassigned_transcript_779 other downstream 3668 26532020 ~ 26532091 (+) True trnah-gug_16
unassigned_transcript_780 other downstream 3979 26532331 ~ 26532403 (+) True trnak-uuu_81