RNA id: unassigned_transcript_805



Basic Information


Item Value
RNA id unassigned_transcript_805
length 81
RNA type tRNA
GC content 0.58
exon number 1
gene id trnas-aga_94
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26591120 ~ 26591200 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gtagtcgtggcgagtggttaaggcgatggactagaaatccattggggtctcccggcgcaggttcgaatcctgccgactacg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46371 lncRNA downstream 112187 26478716 ~ 26478933 (-) True G31413
TU46360 lncRNA downstream 157334 26428152 ~ 26433786 (-) True G31402
XR_006250605.1 lncRNA downstream 286448 26303662 ~ 26304672 (-) True LOC122342589
TU46357 lncRNA downstream 352882 26237920 ~ 26238238 (-) True G31399
XR_006250568.1 lncRNA downstream 569736 26020548 ~ 26021384 (-) True LOC122342449
XR_006250546.1 lncRNA upstream 97413 26688613 ~ 26689452 (-) True LOC122342214
XR_006250601.1 lncRNA upstream 140460 26731660 ~ 26732626 (-) True LOC122342580
TU46385 lncRNA upstream 310506 26901706 ~ 26901995 (-) True G31425
TU46386 lncRNA upstream 397387 26988587 ~ 26988954 (-) True G31426
TU46454 lncRNA upstream 769704 27360904 ~ 27406081 (-) False G31462
XM_043236140.1 mRNA downstream 565013 26023937 ~ 26026107 (-) True LOC122342359
XM_043236138.1 mRNA downstream 567876 26022144 ~ 26023244 (-) True LOC122342358
XM_043236136.1 mRNA downstream 635499 25952760 ~ 25955621 (-) True LOC122342356
XM_043237668.1 mRNA downstream 812599 25762532 ~ 25778521 (-) True hm13
XM_043236143.1 mRNA upstream 98784 26689984 ~ 26691677 (-) True LOC122342363
XM_043236144.1 mRNA upstream 101421 26692621 ~ 26693546 (-) True LOC122342364
XM_043236146.1 mRNA upstream 274573 26865773 ~ 26869148 (-) True LOC122342367
XM_043236245.1 mRNA upstream 792553 27383753 ~ 27389398 (-) True LOC122342454
XM_043238050.1 mRNA upstream 817888 27409088 ~ 27415650 (-) True flot1a
unassigned_transcript_804 other downstream 262 26590777 ~ 26590858 (-) True trnas-uga_91
unassigned_transcript_803 other downstream 13103 26577936 ~ 26578017 (-) True trnas-aga_93
unassigned_transcript_802 other downstream 16069 26574971 ~ 26575051 (-) True trnas-uga_90
unassigned_transcript_801 other downstream 21314 26569727 ~ 26569806 (-) True trnas-aga_92
unassigned_transcript_800 other downstream 23969 26567070 ~ 26567151 (-) True trnas-aga_91
unassigned_transcript_806 other upstream 5726 26596926 ~ 26596997 (-) True trnah-gug_18
unassigned_transcript_807 other upstream 12122 26603322 ~ 26603404 (-) True trnas-aga_95
unassigned_transcript_808 other upstream 14762 26605962 ~ 26606042 (-) True trnas-aga_96
unassigned_transcript_809 other upstream 17058 26608258 ~ 26608341 (-) True trnas-uga_92
unassigned_transcript_810 other upstream 17405 26608605 ~ 26608685 (-) True trnas-aga_97