RNA id: unassigned_transcript_809



Basic Information


Item Value
RNA id unassigned_transcript_809
length 84
RNA type tRNA
GC content 0.60
exon number 1
gene id trnas-uga_92
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26608258 ~ 26608341 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gtagtcgtggccgagaggttaaaggcgatggacttgaaatccattggggtctcccgcgcgcaggttcgaaccctgccgactacg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46371 lncRNA downstream 129325 26478716 ~ 26478933 (-) True G31413
TU46360 lncRNA downstream 174472 26428152 ~ 26433786 (-) True G31402
XR_006250605.1 lncRNA downstream 303586 26303662 ~ 26304672 (-) True LOC122342589
TU46357 lncRNA downstream 370020 26237920 ~ 26238238 (-) True G31399
XR_006250568.1 lncRNA downstream 586874 26020548 ~ 26021384 (-) True LOC122342449
XR_006250546.1 lncRNA upstream 80272 26688613 ~ 26689452 (-) True LOC122342214
XR_006250601.1 lncRNA upstream 123319 26731660 ~ 26732626 (-) True LOC122342580
TU46385 lncRNA upstream 293365 26901706 ~ 26901995 (-) True G31425
TU46386 lncRNA upstream 380246 26988587 ~ 26988954 (-) True G31426
TU46454 lncRNA upstream 752563 27360904 ~ 27406081 (-) False G31462
XM_043236140.1 mRNA downstream 582151 26023937 ~ 26026107 (-) True LOC122342359
XM_043236138.1 mRNA downstream 585014 26022144 ~ 26023244 (-) True LOC122342358
XM_043236136.1 mRNA downstream 652637 25952760 ~ 25955621 (-) True LOC122342356
XM_043237668.1 mRNA downstream 829737 25762532 ~ 25778521 (-) True hm13
XM_043236143.1 mRNA upstream 81643 26689984 ~ 26691677 (-) True LOC122342363
XM_043236144.1 mRNA upstream 84280 26692621 ~ 26693546 (-) True LOC122342364
XM_043236146.1 mRNA upstream 257432 26865773 ~ 26869148 (-) True LOC122342367
XM_043236245.1 mRNA upstream 775412 27383753 ~ 27389398 (-) True LOC122342454
XM_043238050.1 mRNA upstream 800747 27409088 ~ 27415650 (-) True flot1a
unassigned_transcript_808 other downstream 2216 26605962 ~ 26606042 (-) True trnas-aga_96
unassigned_transcript_807 other downstream 4854 26603322 ~ 26603404 (-) True trnas-aga_95
unassigned_transcript_806 other downstream 11261 26596926 ~ 26596997 (-) True trnah-gug_18
unassigned_transcript_805 other downstream 17058 26591120 ~ 26591200 (-) True trnas-aga_94
unassigned_transcript_804 other downstream 17400 26590777 ~ 26590858 (-) True trnas-uga_91
unassigned_transcript_810 other upstream 264 26608605 ~ 26608685 (-) True trnas-aga_97
unassigned_transcript_811 other upstream 3705 26612046 ~ 26612117 (-) True trnak-uuu_86
unassigned_transcript_812 other upstream 5181 26613522 ~ 26613602 (-) True trnas-uga_93
unassigned_transcript_813 other upstream 6334 26614675 ~ 26614747 (-) True trnak-uuu_87
unassigned_transcript_814 other upstream 16463 26624804 ~ 26624885 (-) True trnas-uga_94