RNA id: unassigned_transcript_813



Basic Information


Item Value
RNA id unassigned_transcript_813
length 73
RNA type tRNA
GC content 0.55
exon number 1
gene id trnak-uuu_87
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26614675 ~ 26614747 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gcctggatagctcagtcggtagagcatcagacttttaatctgagggtccagggttcaagtccctgttcgggcg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46371 lncRNA downstream 135742 26478716 ~ 26478933 (-) True G31413
TU46360 lncRNA downstream 180889 26428152 ~ 26433786 (-) True G31402
XR_006250605.1 lncRNA downstream 310003 26303662 ~ 26304672 (-) True LOC122342589
TU46357 lncRNA downstream 376437 26237920 ~ 26238238 (-) True G31399
XR_006250568.1 lncRNA downstream 593291 26020548 ~ 26021384 (-) True LOC122342449
XR_006250546.1 lncRNA upstream 73866 26688613 ~ 26689452 (-) True LOC122342214
XR_006250601.1 lncRNA upstream 116913 26731660 ~ 26732626 (-) True LOC122342580
TU46385 lncRNA upstream 286959 26901706 ~ 26901995 (-) True G31425
TU46386 lncRNA upstream 373840 26988587 ~ 26988954 (-) True G31426
TU46454 lncRNA upstream 746157 27360904 ~ 27406081 (-) False G31462
XM_043236140.1 mRNA downstream 588568 26023937 ~ 26026107 (-) True LOC122342359
XM_043236138.1 mRNA downstream 591431 26022144 ~ 26023244 (-) True LOC122342358
XM_043236136.1 mRNA downstream 659054 25952760 ~ 25955621 (-) True LOC122342356
XM_043237668.1 mRNA downstream 836154 25762532 ~ 25778521 (-) True hm13
XM_043236143.1 mRNA upstream 75237 26689984 ~ 26691677 (-) True LOC122342363
XM_043236144.1 mRNA upstream 77874 26692621 ~ 26693546 (-) True LOC122342364
XM_043236146.1 mRNA upstream 251026 26865773 ~ 26869148 (-) True LOC122342367
XM_043236245.1 mRNA upstream 769006 27383753 ~ 27389398 (-) True LOC122342454
XM_043238050.1 mRNA upstream 794341 27409088 ~ 27415650 (-) True flot1a
unassigned_transcript_812 other downstream 1073 26613522 ~ 26613602 (-) True trnas-uga_93
unassigned_transcript_811 other downstream 2558 26612046 ~ 26612117 (-) True trnak-uuu_86
unassigned_transcript_810 other downstream 5990 26608605 ~ 26608685 (-) True trnas-aga_97
unassigned_transcript_809 other downstream 6334 26608258 ~ 26608341 (-) True trnas-uga_92
unassigned_transcript_808 other downstream 8633 26605962 ~ 26606042 (-) True trnas-aga_96
unassigned_transcript_814 other upstream 10057 26624804 ~ 26624885 (-) True trnas-uga_94
unassigned_transcript_815 other upstream 15049 26629796 ~ 26629877 (-) True trnas-uga_95
unassigned_transcript_816 other upstream 15397 26630144 ~ 26630225 (-) True trnas-aga_98
unassigned_transcript_817 other upstream 18255 26633002 ~ 26633074 (-) True trnak-uuu_88
unassigned_transcript_818 other upstream 19742 26634489 ~ 26634569 (-) True trnas-uga_96