RNA id: unassigned_transcript_818



Basic Information


Item Value
RNA id unassigned_transcript_818
length 81
RNA type tRNA
GC content 0.57
exon number 1
gene id trnas-uga_96
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26634489 ~ 26634569 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gtagtcgtggccgagaggttaaggcgatggacttgaaatccattggtgtctcccgcgcaggttcgaatcctgccgactacg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46371 lncRNA downstream 155556 26478716 ~ 26478933 (-) True G31413
TU46360 lncRNA downstream 200703 26428152 ~ 26433786 (-) True G31402
XR_006250605.1 lncRNA downstream 329817 26303662 ~ 26304672 (-) True LOC122342589
TU46357 lncRNA downstream 396251 26237920 ~ 26238238 (-) True G31399
XR_006250568.1 lncRNA downstream 613105 26020548 ~ 26021384 (-) True LOC122342449
XR_006250546.1 lncRNA upstream 54044 26688613 ~ 26689452 (-) True LOC122342214
XR_006250601.1 lncRNA upstream 97091 26731660 ~ 26732626 (-) True LOC122342580
TU46385 lncRNA upstream 267137 26901706 ~ 26901995 (-) True G31425
TU46386 lncRNA upstream 354018 26988587 ~ 26988954 (-) True G31426
TU46454 lncRNA upstream 726335 27360904 ~ 27406081 (-) False G31462
XM_043236140.1 mRNA downstream 608382 26023937 ~ 26026107 (-) True LOC122342359
XM_043236138.1 mRNA downstream 611245 26022144 ~ 26023244 (-) True LOC122342358
XM_043236136.1 mRNA downstream 678868 25952760 ~ 25955621 (-) True LOC122342356
XM_043237668.1 mRNA downstream 855968 25762532 ~ 25778521 (-) True hm13
XM_043236143.1 mRNA upstream 55415 26689984 ~ 26691677 (-) True LOC122342363
XM_043236144.1 mRNA upstream 58052 26692621 ~ 26693546 (-) True LOC122342364
XM_043236146.1 mRNA upstream 231204 26865773 ~ 26869148 (-) True LOC122342367
XM_043236245.1 mRNA upstream 749184 27383753 ~ 27389398 (-) True LOC122342454
XM_043238050.1 mRNA upstream 774519 27409088 ~ 27415650 (-) True flot1a
unassigned_transcript_817 other downstream 1415 26633002 ~ 26633074 (-) True trnak-uuu_88
unassigned_transcript_816 other downstream 4264 26630144 ~ 26630225 (-) True trnas-aga_98
unassigned_transcript_815 other downstream 4612 26629796 ~ 26629877 (-) True trnas-uga_95
unassigned_transcript_814 other downstream 9604 26624804 ~ 26624885 (-) True trnas-uga_94
unassigned_transcript_813 other downstream 19742 26614675 ~ 26614747 (-) True trnak-uuu_87
unassigned_transcript_819 other upstream 464 26635033 ~ 26635105 (-) True trnak-uuu_89
unassigned_transcript_820 other upstream 1925 26636494 ~ 26636574 (-) True trnas-uga_97
unassigned_transcript_821 other upstream 2269 26636838 ~ 26636919 (-) True trnas-aga_99
unassigned_transcript_826 other upstream 30169 26664738 ~ 26664819 (-) True trnas-aga_100
unassigned_transcript_827 other upstream 36515 26671084 ~ 26671156 (-) True trnav-aac_3