RNA id: unassigned_transcript_821



Basic Information


Item Value
RNA id unassigned_transcript_821
length 82
RNA type tRNA
GC content 0.59
exon number 1
gene id trnas-aga_99
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26636838 ~ 26636919 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gtagtcgtggccgagtggttaaggcgatggactagaaatccattggggtctccccgcgcaggttcgaatcctgccgactacg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46371 lncRNA downstream 157905 26478716 ~ 26478933 (-) True G31413
TU46360 lncRNA downstream 203052 26428152 ~ 26433786 (-) True G31402
XR_006250605.1 lncRNA downstream 332166 26303662 ~ 26304672 (-) True LOC122342589
TU46357 lncRNA downstream 398600 26237920 ~ 26238238 (-) True G31399
XR_006250568.1 lncRNA downstream 615454 26020548 ~ 26021384 (-) True LOC122342449
XR_006250546.1 lncRNA upstream 51694 26688613 ~ 26689452 (-) True LOC122342214
XR_006250601.1 lncRNA upstream 94741 26731660 ~ 26732626 (-) True LOC122342580
TU46385 lncRNA upstream 264787 26901706 ~ 26901995 (-) True G31425
TU46386 lncRNA upstream 351668 26988587 ~ 26988954 (-) True G31426
TU46454 lncRNA upstream 723985 27360904 ~ 27406081 (-) False G31462
XM_043236140.1 mRNA downstream 610731 26023937 ~ 26026107 (-) True LOC122342359
XM_043236138.1 mRNA downstream 613594 26022144 ~ 26023244 (-) True LOC122342358
XM_043236136.1 mRNA downstream 681217 25952760 ~ 25955621 (-) True LOC122342356
XM_043237668.1 mRNA downstream 858317 25762532 ~ 25778521 (-) True hm13
XM_043236143.1 mRNA upstream 53065 26689984 ~ 26691677 (-) True LOC122342363
XM_043236144.1 mRNA upstream 55702 26692621 ~ 26693546 (-) True LOC122342364
XM_043236146.1 mRNA upstream 228854 26865773 ~ 26869148 (-) True LOC122342367
XM_043236245.1 mRNA upstream 746834 27383753 ~ 27389398 (-) True LOC122342454
XM_043238050.1 mRNA upstream 772169 27409088 ~ 27415650 (-) True flot1a
unassigned_transcript_820 other downstream 264 26636494 ~ 26636574 (-) True trnas-uga_97
unassigned_transcript_819 other downstream 1733 26635033 ~ 26635105 (-) True trnak-uuu_89
unassigned_transcript_818 other downstream 2269 26634489 ~ 26634569 (-) True trnas-uga_96
unassigned_transcript_817 other downstream 3764 26633002 ~ 26633074 (-) True trnak-uuu_88
unassigned_transcript_816 other downstream 6613 26630144 ~ 26630225 (-) True trnas-aga_98
unassigned_transcript_826 other upstream 27819 26664738 ~ 26664819 (-) True trnas-aga_100
unassigned_transcript_827 other upstream 34165 26671084 ~ 26671156 (-) True trnav-aac_3
unassigned_transcript_828 other upstream 35250 26672169 ~ 26672241 (-) True trnav-uac_4
unassigned_transcript_829 other upstream 36002 26672921 ~ 26672993 (-) True trnav-cac_1
unassigned_transcript_830 other upstream 60294 26697213 ~ 26697296 (-) True trnas-uga_98