RNA id: unassigned_transcript_829



Basic Information


Item Value
RNA id unassigned_transcript_829
length 73
RNA type tRNA
GC content 0.49
exon number 1
gene id trnav-cac_1
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26672921 ~ 26672993 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gtttCCATAATGTAGTGGTTATCACATTCGcctcacacgcgaaaggtccccggttcaaaacCGGGaggaaaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46371 lncRNA downstream 193988 26478716 ~ 26478933 (-) True G31413
TU46360 lncRNA downstream 239135 26428152 ~ 26433786 (-) True G31402
XR_006250605.1 lncRNA downstream 368249 26303662 ~ 26304672 (-) True LOC122342589
TU46357 lncRNA downstream 434683 26237920 ~ 26238238 (-) True G31399
XR_006250568.1 lncRNA downstream 651537 26020548 ~ 26021384 (-) True LOC122342449
XR_006250546.1 lncRNA upstream 15620 26688613 ~ 26689452 (-) True LOC122342214
XR_006250601.1 lncRNA upstream 58667 26731660 ~ 26732626 (-) True LOC122342580
TU46385 lncRNA upstream 228713 26901706 ~ 26901995 (-) True G31425
TU46386 lncRNA upstream 315594 26988587 ~ 26988954 (-) True G31426
TU46454 lncRNA upstream 687911 27360904 ~ 27406081 (-) False G31462
XM_043236140.1 mRNA downstream 646814 26023937 ~ 26026107 (-) True LOC122342359
XM_043236138.1 mRNA downstream 649677 26022144 ~ 26023244 (-) True LOC122342358
XM_043236136.1 mRNA downstream 717300 25952760 ~ 25955621 (-) True LOC122342356
XM_043237668.1 mRNA downstream 894400 25762532 ~ 25778521 (-) True hm13
XM_043236143.1 mRNA upstream 16991 26689984 ~ 26691677 (-) True LOC122342363
XM_043236144.1 mRNA upstream 19628 26692621 ~ 26693546 (-) True LOC122342364
XM_043236146.1 mRNA upstream 192780 26865773 ~ 26869148 (-) True LOC122342367
XM_043236245.1 mRNA upstream 710760 27383753 ~ 27389398 (-) True LOC122342454
XM_043238050.1 mRNA upstream 736095 27409088 ~ 27415650 (-) True flot1a
unassigned_transcript_828 other downstream 680 26672169 ~ 26672241 (-) True trnav-uac_4
unassigned_transcript_827 other downstream 1765 26671084 ~ 26671156 (-) True trnav-aac_3
unassigned_transcript_826 other downstream 8102 26664738 ~ 26664819 (-) True trnas-aga_100
unassigned_transcript_821 other downstream 36002 26636838 ~ 26636919 (-) True trnas-aga_99
unassigned_transcript_820 other downstream 36347 26636494 ~ 26636574 (-) True trnas-uga_97
unassigned_transcript_830 other upstream 24220 26697213 ~ 26697296 (-) True trnas-uga_98
unassigned_transcript_831 other upstream 24567 26697560 ~ 26697642 (-) True trnas-aga_101
unassigned_transcript_832 other upstream 25386 26698379 ~ 26698451 (-) True trnak-uuu_90
unassigned_transcript_833 other upstream 25568 26698561 ~ 26698642 (-) True trnas-uga_99
unassigned_transcript_834 other upstream 26108 26699101 ~ 26699173 (-) True trnak-uuu_91