RNA id: unassigned_transcript_830



Basic Information


Item Value
RNA id unassigned_transcript_830
length 84
RNA type tRNA
GC content 0.58
exon number 1
gene id trnas-uga_98
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26697213 ~ 26697296 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gtagtcgtggccgagaggttaaggcgatggacttgaaatccattggggtctctcagcgcgcaggttcgaaccctgccgactacg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006250546.1 lncRNA downstream 7761 26688613 ~ 26689452 (-) True LOC122342214
TU46371 lncRNA downstream 218280 26478716 ~ 26478933 (-) True G31413
TU46360 lncRNA downstream 263427 26428152 ~ 26433786 (-) True G31402
XR_006250605.1 lncRNA downstream 392541 26303662 ~ 26304672 (-) True LOC122342589
TU46357 lncRNA downstream 458975 26237920 ~ 26238238 (-) True G31399
XR_006250601.1 lncRNA upstream 34364 26731660 ~ 26732626 (-) True LOC122342580
TU46385 lncRNA upstream 204410 26901706 ~ 26901995 (-) True G31425
TU46386 lncRNA upstream 291291 26988587 ~ 26988954 (-) True G31426
TU46454 lncRNA upstream 663608 27360904 ~ 27406081 (-) False G31462
TU46455 lncRNA upstream 663608 27360904 ~ 27406081 (-) True G31462
XM_043236144.1 mRNA downstream 3667 26692621 ~ 26693546 (-) True LOC122342364
XM_043236143.1 mRNA downstream 5536 26689984 ~ 26691677 (-) True LOC122342363
XM_043236140.1 mRNA downstream 671106 26023937 ~ 26026107 (-) True LOC122342359
XM_043236138.1 mRNA downstream 673969 26022144 ~ 26023244 (-) True LOC122342358
XM_043236136.1 mRNA downstream 741592 25952760 ~ 25955621 (-) True LOC122342356
XM_043236146.1 mRNA upstream 168477 26865773 ~ 26869148 (-) True LOC122342367
XM_043236245.1 mRNA upstream 686457 27383753 ~ 27389398 (-) True LOC122342454
XM_043238050.1 mRNA upstream 711792 27409088 ~ 27415650 (-) True flot1a
XM_043237703.1 mRNA upstream 1249700 27946996 ~ 27951997 (-) True pdk2b
XM_043237697.1 mRNA upstream 1269013 27966309 ~ 27969769 (-) False LOC122343310
unassigned_transcript_829 other downstream 24220 26672921 ~ 26672993 (-) True trnav-cac_1
unassigned_transcript_828 other downstream 24972 26672169 ~ 26672241 (-) True trnav-uac_4
unassigned_transcript_827 other downstream 26057 26671084 ~ 26671156 (-) True trnav-aac_3
unassigned_transcript_826 other downstream 32394 26664738 ~ 26664819 (-) True trnas-aga_100
unassigned_transcript_821 other downstream 60294 26636838 ~ 26636919 (-) True trnas-aga_99
unassigned_transcript_831 other upstream 264 26697560 ~ 26697642 (-) True trnas-aga_101
unassigned_transcript_832 other upstream 1083 26698379 ~ 26698451 (-) True trnak-uuu_90
unassigned_transcript_833 other upstream 1265 26698561 ~ 26698642 (-) True trnas-uga_99
unassigned_transcript_834 other upstream 1805 26699101 ~ 26699173 (-) True trnak-uuu_91
unassigned_transcript_835 other upstream 3302 26700598 ~ 26700679 (-) True trnas-uga_100