RNA id: unassigned_transcript_836



Basic Information


Item Value
RNA id unassigned_transcript_836
length 80
RNA type tRNA
GC content 0.58
exon number 1
gene id trnas-aga_102
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26700946 ~ 26701025 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gtagtcgtggccgagtggttaaggcgatggactagaaatccattggggtctccccgcaggttcgaatcctgccgactacg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006250546.1 lncRNA downstream 11494 26688613 ~ 26689452 (-) True LOC122342214
TU46371 lncRNA downstream 222013 26478716 ~ 26478933 (-) True G31413
TU46360 lncRNA downstream 267160 26428152 ~ 26433786 (-) True G31402
XR_006250605.1 lncRNA downstream 396274 26303662 ~ 26304672 (-) True LOC122342589
TU46357 lncRNA downstream 462708 26237920 ~ 26238238 (-) True G31399
XR_006250601.1 lncRNA upstream 30635 26731660 ~ 26732626 (-) True LOC122342580
TU46385 lncRNA upstream 200681 26901706 ~ 26901995 (-) True G31425
TU46386 lncRNA upstream 287562 26988587 ~ 26988954 (-) True G31426
TU46454 lncRNA upstream 659879 27360904 ~ 27406081 (-) False G31462
TU46455 lncRNA upstream 659879 27360904 ~ 27406081 (-) True G31462
XM_043236144.1 mRNA downstream 7400 26692621 ~ 26693546 (-) True LOC122342364
XM_043236143.1 mRNA downstream 9269 26689984 ~ 26691677 (-) True LOC122342363
XM_043236140.1 mRNA downstream 674839 26023937 ~ 26026107 (-) True LOC122342359
XM_043236138.1 mRNA downstream 677702 26022144 ~ 26023244 (-) True LOC122342358
XM_043236136.1 mRNA downstream 745325 25952760 ~ 25955621 (-) True LOC122342356
XM_043236146.1 mRNA upstream 164748 26865773 ~ 26869148 (-) True LOC122342367
XM_043236245.1 mRNA upstream 682728 27383753 ~ 27389398 (-) True LOC122342454
XM_043238050.1 mRNA upstream 708063 27409088 ~ 27415650 (-) True flot1a
XM_043237703.1 mRNA upstream 1245971 27946996 ~ 27951997 (-) True pdk2b
XM_043237697.1 mRNA upstream 1265284 27966309 ~ 27969769 (-) False LOC122343310
unassigned_transcript_835 other downstream 267 26700598 ~ 26700679 (-) True trnas-uga_100
unassigned_transcript_834 other downstream 1773 26699101 ~ 26699173 (-) True trnak-uuu_91
unassigned_transcript_833 other downstream 2304 26698561 ~ 26698642 (-) True trnas-uga_99
unassigned_transcript_832 other downstream 2495 26698379 ~ 26698451 (-) True trnak-uuu_90
unassigned_transcript_831 other downstream 3304 26697560 ~ 26697642 (-) True trnas-aga_101
unassigned_transcript_837 other upstream 731 26701756 ~ 26701828 (-) True trnak-uuu_92
unassigned_transcript_838 other upstream 1044 26702069 ~ 26702140 (-) True trnah-gug_19
unassigned_transcript_839 other upstream 2267 26703292 ~ 26703374 (-) True trnas-uga_101
unassigned_transcript_840 other upstream 2614 26703639 ~ 26703720 (-) True trnas-aga_103
unassigned_transcript_841 other upstream 3422 26704447 ~ 26704519 (-) True trnak-uuu_93

Expression Profile