RNA id: unassigned_transcript_845



Basic Information


Item Value
RNA id unassigned_transcript_845
length 73
RNA type tRNA
GC content 0.55
exon number 1
gene id trnak-uuu_95
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26709723 ~ 26709795 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gcctggatagctcagtcggtagagcatcagacttttaatctgagggtccagggttcaagtccctgttcgggcg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006250546.1 lncRNA downstream 20271 26688613 ~ 26689452 (-) True LOC122342214
TU46371 lncRNA downstream 230790 26478716 ~ 26478933 (-) True G31413
TU46360 lncRNA downstream 275937 26428152 ~ 26433786 (-) True G31402
XR_006250605.1 lncRNA downstream 405051 26303662 ~ 26304672 (-) True LOC122342589
TU46357 lncRNA downstream 471485 26237920 ~ 26238238 (-) True G31399
XR_006250601.1 lncRNA upstream 21865 26731660 ~ 26732626 (-) True LOC122342580
TU46385 lncRNA upstream 191911 26901706 ~ 26901995 (-) True G31425
TU46386 lncRNA upstream 278792 26988587 ~ 26988954 (-) True G31426
TU46454 lncRNA upstream 651109 27360904 ~ 27406081 (-) False G31462
TU46455 lncRNA upstream 651109 27360904 ~ 27406081 (-) True G31462
XM_043236144.1 mRNA downstream 16177 26692621 ~ 26693546 (-) True LOC122342364
XM_043236143.1 mRNA downstream 18046 26689984 ~ 26691677 (-) True LOC122342363
XM_043236140.1 mRNA downstream 683616 26023937 ~ 26026107 (-) True LOC122342359
XM_043236138.1 mRNA downstream 686479 26022144 ~ 26023244 (-) True LOC122342358
XM_043236136.1 mRNA downstream 754102 25952760 ~ 25955621 (-) True LOC122342356
XM_043236146.1 mRNA upstream 155978 26865773 ~ 26869148 (-) True LOC122342367
XM_043236245.1 mRNA upstream 673958 27383753 ~ 27389398 (-) True LOC122342454
XM_043238050.1 mRNA upstream 699293 27409088 ~ 27415650 (-) True flot1a
XM_043237703.1 mRNA upstream 1237201 27946996 ~ 27951997 (-) True pdk2b
XM_043237697.1 mRNA upstream 1256514 27966309 ~ 27969769 (-) False LOC122343310
unassigned_transcript_844 other downstream 730 26708913 ~ 26708993 (-) True trnas-aga_105
unassigned_transcript_843 other downstream 2568 26707083 ~ 26707155 (-) True trnak-uuu_94
unassigned_transcript_842 other downstream 3365 26706277 ~ 26706358 (-) True trnas-aga_104
unassigned_transcript_841 other downstream 5204 26704447 ~ 26704519 (-) True trnak-uuu_93
unassigned_transcript_840 other downstream 6003 26703639 ~ 26703720 (-) True trnas-aga_103
unassigned_transcript_846 other upstream 1468 26711263 ~ 26711343 (-) True trnas-uga_102
unassigned_transcript_847 other upstream 1808 26711603 ~ 26711685 (-) True trnas-aga_106
unassigned_transcript_848 other upstream 5983 26715778 ~ 26715850 (-) True trnak-uuu_96
unassigned_transcript_849 other upstream 7474 26717269 ~ 26717350 (-) True trnas-uga_103
unassigned_transcript_850 other upstream 7818 26717613 ~ 26717695 (-) True trnas-aga_107